fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb018421 not found in 249aa AT2G40220.1 1st_1st 0.200374531 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40220.1     MDPLASQHQHNHLEDNNQTLTHNNPQSDSTTDSSTSSA----QRKRKG---KGGPDNSKF
Sb018421_Sorbi1 MEP-------------------NNNQPAATAEEAAAGSGPGGEGGRKGKAPKGGPENGKF
                *:*                   ** *. :*::.:::.:    :  ***   ****:*.**

AT2G40220.1     RYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPS
Sb018421_Sorbi1 RYRGVRQRSWGKWVAEIREPRKRSRKWLGTFATAEDAARAYDRAALLLYGPRAHLNLTSP
                ***********************:*********************: ***.**:****..

AT2G40220.1     SPSSVSSSSSSVSAASSPSTSSSSTQTLRPLLPRPAAATVGGGANFGPYGIPFNNNIFLN
Sb018421_Sorbi1 PPPTLAAPRS--HPHSSATSSSSAPPALRPLLPRP----------------PLHHQ--LS
                .*.::::. *   . **.::***:. :********                *::::  *.

AT2G40220.1     GGTSMLCPSYGFFPQQQQQQNQMVQMGQFQHQQYQNLHSNTNNNKISDIELTDVPVTNST
Sb018421_Sorbi1 SGACAPAPDFHHHHQQFQCHHLLPQAQPTPPLYYAN---------------TATASTVTT
                .*:.  .*.: .. ** * :: : *        * *               * .. * :*

AT2G40220.1     SFHHEVALGQEQGGSGCNNNSSMEDLNSLAGSVGSSLSITHPPPLVDPVCSMGLDPGYMV
Sb018421_Sorbi1 TVPTRVAVPQE--------------------------------PAVAPAEPQASTPEEA-
                :.  .**: **                                * * *. . .  *    

AT2G40220.1     GDGSSTIWPFGGEEEYSHNWGSIWDFIDPILGEFY------
Sb018421_Sorbi1 --PRETGWDYHGGEEEDYAAALLWDEPEPF---FWFDVFLK
                    .* * : * ** .:  . :**  :*:   *:
BoxShade v3.31 C (beta, 970507) Output
AT2G40220.1     M D P L A S Q H Q H N H L E D N N Q T L T H N N P Q S D S T T D S S T S S A - - - - Q R K R K G - - - K G G P D N S K F
Sb018421_Sorbi1    M E P - - - - - - - - - - - - - - - - - - - N N N Q P A A T A E E A A A G S G P G G E G G R K G K A P K G G P E N G K F
 
AT2G40220.1     R Y R G V R Q R S W G K W V A E I R E P R K R T R K W L G T F A T A E D A A R A Y D R A A V Y L Y G S R A Q L N L T P S
Sb018421_Sorbi1    R Y R G V R Q R S W G K W V A E I R E P R K R S R K W L G T F A T A E D A A R A Y D R A A L L L Y G P R A H L N L T S P
 
AT2G40220.1     S P S S V S S S S S S V S A A S S P S T S S S S T Q T L R P L L P R P A A A T V G G G A N F G P Y G I P F N N N I F L N
Sb018421_Sorbi1    P P P T L A A P R S - - H P H S S A T S S S S A P P A L R P L L P R P - - - - - - - - - - - - - - - - P L H H Q - - L S
 
AT2G40220.1     G G T S M L C P S Y G F F P Q Q Q Q Q Q N Q M V Q M G Q F Q H Q Q Y Q N L H S N T N N N K I S D I E L T D V P V T N S T
Sb018421_Sorbi1    S G A C A P A P D F H H H H Q Q F Q C H H L L P Q A Q P T P P L Y Y A N - - - - - - - - - - - - - - - T A T A S T V T T
 
AT2G40220.1     S F H H E V A L G Q E Q G G S G C N N N S S M E D L N S L A G S V G S S L S I T H P P P L V D P V C S M G L D P G Y M V
Sb018421_Sorbi1    T V P T R V A V P Q E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P A V A P A E P Q A S T P E E A -
 
AT2G40220.1     G D G S S T I W P F G G E E E Y S H N W G S I W D F I D P I L G E F Y - - - - - -
Sb018421_Sorbi1    - - P R E T G W D Y H G G E E E D Y A A A L L W D E P E P F - - - F W F D V F L K
 
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