Input
| Putative repression domain
|
|
AT2G40260.1 |
NKSDQDLDLSLSLKVP at 332/410 in AT2G40260.1 |
|
HQDIKSLSLSLSSSGS at 368/410 in AT2G40260.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt035782 |
LDSDCNLDLNLALKRS in 305/366 |
AT2G40260.1 |
1st_1st |
0.263513513 |
Ib |
ARMANTLDLTL in 361/366 |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT2G40260.1 MRSSSQNSENSKTCLSNNIKATTKNEEDKDEEDDEEGEEDEEERSGDQSPSSNSYEEESG
pt035782_POPTR_ -MEESDNFGGSKSSYSN-------KEVEQDEGDEEEVDKISFKSRNEGVSTSNSSVEEN-
..*:* .**:. ** :* ::** *:** :: . : .: .:*** **.
AT2G40260.1 SHHHDQNKKNGGSVRPYNRSKTPRLRWTPELHICFLQAVERLGGPDRATPKLVLQLMNVK
pt035782_POPTR_ ----EKEAVSTGSVRQYIRSKMPRLRWTPDLHLCFVHAVERLGGQDRATPKLVLQMMNIK
::: . **** * *** *******:**:**::******* **********:**:*
AT2G40260.1 GLSIAHVKSHLQMYRSKKTDEPNEGDQGFSFEHGAGYTYNLSQLPMLQSFDQRPSSSLGY
pt035782_POPTR_ GLSIAHVKSHLQMYRSKRSDEPNQG-QGLFFEGGDHQIYNLSQLPVLQNFNQRSSCNLRY
*****************::****:* **: ** * *******:**.*:**.*..* *
AT2G40260.1 GGGSWTDHRRQIYRSPWRGLTTRENTRTRQTMFSSQPGERYHGVSNSILNDKNKTISFRI
pt035782_POPTR_ GDASWRGHDHQMY-SPYKGGTAL--NRFKHGLYSS--------VSERLVIGRNNHNSLNY
*..** .* :*:* **::* *: .* :: ::** **: :: .:*: *:.
AT2G40260.1 NSHEGVHDNNGVAGAVPRIHRSFLEGMKTFN-----KSWGQSLSSNLKS---STATIPQD
pt035782_POPTR_ DSSINIPSLN--VQATSRTHQ-FLEGVKLFQVSRQEESRPSSMESNFIAKLQERSGIDQK
:* .: . * . *..* *: ****:* *: :* .*:.**: : . : * *.
AT2G40260.1 HIATTLNSY--QWEN-AGVAEGSENVLKRKRLLFSDDCNKSDQDLDLSLSLK-VPRTHDN
pt035782_POPTR_ ECLNTTSSADKNWRTIQEMQKGS----KRKTL--DSDCN-----LDLNLALKRSTKDDDG
. .* .* :*.. : :** *** * ..*** ***.*:** .: .*.
AT2G40260.1 LGECLLEDEVKEHDDHQDIKSLSLSLSSSGSSKLDRTIRKEDQTDHKKRKISVLASPLDL
pt035782_POPTR_ LQKCVADG------------SLSVSLSSSSSSKLGRSMEGDGRRKHAR-----MANTLDL
* :*: :. ***:*****.****.*::. :.: .* : :*..***
AT2G40260.1 TL
pt035782_POPTR_ TL
**
BoxShade v3.31 C (beta, 970507) Output
AT2G40260.1 |
M |
R |
S |
S |
S |
Q |
N |
S |
E |
N |
S |
K |
T |
C |
L |
S |
N |
N |
I |
K |
A |
T |
T |
K |
N |
E |
E |
D |
K |
D |
E |
E |
D |
D |
E |
E |
G |
E |
E |
D |
E |
E |
E |
R |
S |
G |
D |
Q |
S |
P |
S |
S |
N |
S |
Y |
E |
E |
E |
S |
G |
pt035782_POPTR_ |
- |
M |
E |
E |
S |
D |
N |
F |
G |
G |
S |
K |
S |
S |
Y |
S |
N |
- |
- |
- |
- |
- |
- |
- |
K |
E |
V |
E |
Q |
D |
E |
G |
D |
E |
E |
E |
V |
D |
K |
I |
S |
F |
K |
S |
R |
N |
E |
G |
V |
S |
T |
S |
N |
S |
S |
V |
E |
E |
N |
- |
|
AT2G40260.1 |
S |
H |
H |
H |
D |
Q |
N |
K |
K |
N |
G |
G |
S |
V |
R |
P |
Y |
N |
R |
S |
K |
T |
P |
R |
L |
R |
W |
T |
P |
E |
L |
H |
I |
C |
F |
L |
Q |
A |
V |
E |
R |
L |
G |
G |
P |
D |
R |
A |
T |
P |
K |
L |
V |
L |
Q |
L |
M |
N |
V |
K |
pt035782_POPTR_ |
- |
- |
- |
- |
E |
K |
E |
A |
V |
S |
T |
G |
S |
V |
R |
Q |
Y |
I |
R |
S |
K |
M |
P |
R |
L |
R |
W |
T |
P |
D |
L |
H |
L |
C |
F |
V |
H |
A |
V |
E |
R |
L |
G |
G |
Q |
D |
R |
A |
T |
P |
K |
L |
V |
L |
Q |
M |
M |
N |
I |
K |
|
AT2G40260.1 |
G |
L |
S |
I |
A |
H |
V |
K |
S |
H |
L |
Q |
M |
Y |
R |
S |
K |
K |
T |
D |
E |
P |
N |
E |
G |
D |
Q |
G |
F |
S |
F |
E |
H |
G |
A |
G |
Y |
T |
Y |
N |
L |
S |
Q |
L |
P |
M |
L |
Q |
S |
F |
D |
Q |
R |
P |
S |
S |
S |
L |
G |
Y |
pt035782_POPTR_ |
G |
L |
S |
I |
A |
H |
V |
K |
S |
H |
L |
Q |
M |
Y |
R |
S |
K |
R |
S |
D |
E |
P |
N |
Q |
G |
- |
Q |
G |
L |
F |
F |
E |
G |
G |
D |
H |
Q |
I |
Y |
N |
L |
S |
Q |
L |
P |
V |
L |
Q |
N |
F |
N |
Q |
R |
S |
S |
C |
N |
L |
R |
Y |
|
AT2G40260.1 |
G |
G |
G |
S |
W |
T |
D |
H |
R |
R |
Q |
I |
Y |
R |
S |
P |
W |
R |
G |
L |
T |
T |
R |
E |
N |
T |
R |
T |
R |
Q |
T |
M |
F |
S |
S |
Q |
P |
G |
E |
R |
Y |
H |
G |
V |
S |
N |
S |
I |
L |
N |
D |
K |
N |
K |
T |
I |
S |
F |
R |
I |
pt035782_POPTR_ |
G |
D |
A |
S |
W |
R |
G |
H |
D |
H |
Q |
M |
Y |
- |
S |
P |
Y |
K |
G |
G |
T |
A |
L |
- |
- |
N |
R |
F |
K |
H |
G |
L |
Y |
S |
S |
- |
- |
- |
- |
- |
- |
- |
- |
V |
S |
E |
R |
L |
V |
I |
G |
R |
N |
N |
H |
N |
S |
L |
N |
Y |
|
AT2G40260.1 |
N |
S |
H |
E |
G |
V |
H |
D |
N |
N |
G |
V |
A |
G |
A |
V |
P |
R |
I |
H |
R |
S |
F |
L |
E |
G |
M |
K |
T |
F |
N |
- |
- |
- |
- |
- |
K |
S |
W |
G |
Q |
S |
L |
S |
S |
N |
L |
K |
S |
- |
- |
- |
S |
T |
A |
T |
I |
P |
Q |
D |
pt035782_POPTR_ |
D |
S |
S |
I |
N |
I |
P |
S |
L |
N |
- |
- |
V |
Q |
A |
T |
S |
R |
T |
H |
Q |
- |
F |
L |
E |
G |
V |
K |
L |
F |
Q |
V |
S |
R |
Q |
E |
E |
S |
R |
P |
S |
S |
M |
E |
S |
N |
F |
I |
A |
K |
L |
Q |
E |
R |
S |
G |
I |
D |
Q |
K |
|
AT2G40260.1 |
H |
I |
A |
T |
T |
L |
N |
S |
Y |
- |
- |
Q |
W |
E |
N |
- |
A |
G |
V |
A |
E |
G |
S |
E |
N |
V |
L |
K |
R |
K |
R |
L |
L |
F |
S |
D |
D |
C |
N |
K |
S |
D |
Q |
D |
L |
D |
L |
S |
L |
S |
L |
K |
- |
V |
P |
R |
T |
H |
D |
N |
pt035782_POPTR_ |
E |
C |
L |
N |
T |
T |
S |
S |
A |
D |
K |
N |
W |
R |
T |
I |
Q |
E |
M |
Q |
K |
G |
S |
- |
- |
- |
- |
K |
R |
K |
T |
L |
- |
- |
D |
S |
D |
C |
N |
- |
- |
- |
- |
- |
L |
D |
L |
N |
L |
A |
L |
K |
R |
S |
T |
K |
D |
D |
D |
G |
|
AT2G40260.1 |
L |
G |
E |
C |
L |
L |
E |
D |
E |
V |
K |
E |
H |
D |
D |
H |
Q |
D |
I |
K |
S |
L |
S |
L |
S |
L |
S |
S |
S |
G |
S |
S |
K |
L |
D |
R |
T |
I |
R |
K |
E |
D |
Q |
T |
D |
H |
K |
K |
R |
K |
I |
S |
V |
L |
A |
S |
P |
L |
D |
L |
pt035782_POPTR_ |
L |
Q |
K |
C |
V |
A |
D |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
L |
S |
V |
S |
L |
S |
S |
S |
S |
S |
S |
K |
L |
G |
R |
S |
M |
E |
G |
D |
G |
R |
R |
K |
H |
A |
R |
- |
- |
- |
- |
- |
M |
A |
N |
T |
L |
D |
L |
|
AT2G40260.1 |
T |
L |
pt035782_POPTR_ |
T |
L |
|
|