fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041846 not found in 287aa AT2G40340.1 1st_1st 0.261589403 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40340.1     ---------MPSEIVD--RKRKSRGTRDVAEILRQWREYNEQIEAESCIDGGGPKSIRKP
pt041846_POPTR_ MGTLIQGSNATSMSMDSTKKRKRASDKSVAETLQKWKEYNEHLDAQG---DGGNKPVRKV
                          .*  :*  :***  . :.*** *::*:****:::*:.   .** *.:** 

AT2G40340.1     PPKGSRKGCMKGKGGPENGICDYRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAAL
pt041846_POPTR_ PAKGSKKGCMKGKGGPENSVCNYRGVRQRTWGKWVAEIREPNRGPRLWLGTFPTAYEAAL
                *.***:************.:*:******* ***********: *.*******.::*****

AT2G40340.1     AYDEAAKAIYGQSARLNLPEITNRSSST------------AATATVSGSVTAFSDESEVC
pt041846_POPTR_ AYDNAARAMYGSCARLNIPEVVNSTSSSKDNFSAVTPSYYSSAASPADSVTT-STHSEVC
                ***:**:*:**..****:**:.* :**:            :::*: :.***: * .****

AT2G40340.1     AREDTNASSGFGQVKLEDCSDEYVLLDS-SQCIKEELKGKEEVRE-----EHNLAVGFGI
pt041846_POPTR_ AYEDPN------QNVLSQAEDWMTNISSQAEVCEQNVSSQAEVYEQNVSSQHIEDCSRGV
                * **.*      *  *.:..*  . :.* ::  ::::..: ** *     :*    . *:

AT2G40340.1     GQDSKRETLDAWLMGNGNEQEPLE--------------FGVDETFDINELLGILNDNNVS
pt041846_POPTR_ EKNSKL------------SQDELKIQSENPSWTNDWHSYGWDEIFSVEELLGDI-DSGMT
                 ::**             .*: *:              :* ** *.::**** : *..::

AT2G40340.1     GQETMQYQVDRHPNFSYQTQFPNSNLLGSLNPMEIAQPGVDYGCPYVQPSDMENYGIDLD
pt041846_POPTR_ GAEGY---------FS--------------------------------------------
                * *           **                                            

AT2G40340.1     HRRFNDLDIQDLDFGGDKDVHGST
pt041846_POPTR_ -----------LGF----------
                           *.*
BoxShade v3.31 C (beta, 970507) Output
AT2G40340.1     - - - - - - - - - M P S E I V D - - R K R K S R G T R D V A E I L R Q W R E Y N E Q I E A E S C I D G G G P K S I R K P
pt041846_POPTR_    M G T L I Q G S N A T S M S M D S T K K R K R A S D K S V A E T L Q K W K E Y N E H L D A Q G - - - D G G N K P V R K V
 
AT2G40340.1     P P K G S R K G C M K G K G G P E N G I C D Y R G V R Q R R W G K W V A E I R E P D G G A R L W L G T F S S S Y E A A L
pt041846_POPTR_    P A K G S K K G C M K G K G G P E N S V C N Y R G V R Q R T W G K W V A E I R E P N R G P R L W L G T F P T A Y E A A L
 
AT2G40340.1     A Y D E A A K A I Y G Q S A R L N L P E I T N R S S S T - - - - - - - - - - - - A A T A T V S G S V T A F S D E S E V C
pt041846_POPTR_    A Y D N A A R A M Y G S C A R L N I P E V V N S T S S S K D N F S A V T P S Y Y S S A A S P A D S V T T - S T H S E V C
 
AT2G40340.1     A R E D T N A S S G F G Q V K L E D C S D E Y V L L D S - S Q C I K E E L K G K E E V R E - - - - - E H N L A V G F G I
pt041846_POPTR_    A Y E D P N - - - - - - Q N V L S Q A E D W M T N I S S Q A E V C E Q N V S S Q A E V Y E Q N V S S Q H I E D C S R G V
 
AT2G40340.1     G Q D S K R E T L D A W L M G N G N E Q E P L E - - - - - - - - - - - - - - F G V D E T F D I N E L L G I L N D N N V S
pt041846_POPTR_    E K N S K L - - - - - - - - - - - - S Q D E L K I Q S E N P S W T N D W H S Y G W D E I F S V E E L L G D I - D S G M T
 
AT2G40340.1     G Q E T M Q Y Q V D R H P N F S Y Q T Q F P N S N L L G S L N P M E I A Q P G V D Y G C P Y V Q P S D M E N Y G I D L D
pt041846_POPTR_    G A E G Y - - - - - - - - - F S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G40340.1     H R R F N D L D I Q D L D F G G D K D V H G S T
pt041846_POPTR_    - - - - - - - - - - - L G F - - - - - - - - - -
 
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