fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041846 not found in 287aa AT2G40340.1 1st_not 0.576388888 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40350.1     ----------------MPRKRKSRGTRDVAEILRKWREYNEQTEADSCIDGGGSKPIRKA
pt041846_POPTR_ MGTLIQGSNATSMSMDSTKKRKRASDKSVAETLQKWKEYNEHLDAQG---DGGNKPVRKV
                                 .:***  . :.*** *:**:****: :*:.   .**.**:**.

AT2G40350.1     PPKRSRKGCMKGKGGPENGICDYTGVRQRTWGKWVAEIREPGRGAKLWLGTFSSSYEAAL
pt041846_POPTR_ PAKGSKKGCMKGKGGPENSVCNYRGVRQRTWGKWVAEIREPNRGPRLWLGTFPTAYEAAL
                *.* *:************.:*:* *****************.**.:******.::*****

AT2G40350.1     AYDEASKAIYGQSARLNLP---------------LLP--------------------LC-
pt041846_POPTR_ AYDNAARAMYGSCARLNIPEVVNSTSSSKDNFSAVTPSYYSSAASPADSVTTSTHSEVCA
                ***:*::*:**..****:*               : *                    :* 

AT2G40350.1     ---------------------QARLLH---------FLMNLKFVHVR----------IQM
pt041846_POPTR_ YEDPNQNVLSQAEDWMTNISSQAEVCEQNVSSQAEVYEQNVSSQHIEDCSRGVEKNSKLS
                                     **.: .         :  *:.  *:.             

AT2G40350.1     QDLVLVRSD-----------------------------------------
pt041846_POPTR_ QDELKIQSENPSWTNDWHSYGWDEIFSVEELLGDIDSGMTGAEGYFSLGF
                ** : ::*:
BoxShade v3.31 C (beta, 970507) Output
AT2G40350.1     - - - - - - - - - - - - - - - - M P R K R K S R G T R D V A E I L R K W R E Y N E Q T E A D S C I D G G G S K P I R K A
pt041846_POPTR_    M G T L I Q G S N A T S M S M D S T K K R K R A S D K S V A E T L Q K W K E Y N E H L D A Q G - - - D G G N K P V R K V
 
AT2G40350.1     P P K R S R K G C M K G K G G P E N G I C D Y T G V R Q R T W G K W V A E I R E P G R G A K L W L G T F S S S Y E A A L
pt041846_POPTR_    P A K G S K K G C M K G K G G P E N S V C N Y R G V R Q R T W G K W V A E I R E P N R G P R L W L G T F P T A Y E A A L
 
AT2G40350.1     A Y D E A S K A I Y G Q S A R L N L P - - - - - - - - - - - - - - - L L P - - - - - - - - - - - - - - - - - - - - L C -
pt041846_POPTR_    A Y D N A A R A M Y G S C A R L N I P E V V N S T S S S K D N F S A V T P S Y Y S S A A S P A D S V T T S T H S E V C A
 
AT2G40350.1     - - - - - - - - - - - - - - - - - - - - - Q A R L L H - - - - - - - - - F L M N L K F V H V R - - - - - - - - - - I Q M
pt041846_POPTR_    Y E D P N Q N V L S Q A E D W M T N I S S Q A E V C E Q N V S S Q A E V Y E Q N V S S Q H I E D C S R G V E K N S K L S
 
AT2G40350.1     Q D L V L V R S D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt041846_POPTR_    Q D E L K I Q S E N P S W T N D W H S Y G W D E I F S V E E L L G D I D S G M T G A E G Y F S L G F
 
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