fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024715 not found in 345aa AT5G05410.1 1st_not 0.472222222 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40350.1     --------------------MPRK----RKSRGTRDVAEILRKWREYNEQTEADSCIDGG
Sb024715_Sorbi1 MELGDATAGQGAQGDAASGALVRKKRMRRKSTGPDSIAETIKWWKEQNQKLQDES-----
                                    : **    *** *. .:** :: *:* *:: : :*     

AT2G40350.1     GSKPIRKAPPKRSRKGCMKGKGGPENGICDYTGVRQRTWGKWVAEIREPGRGAKLWLGTF
Sb024715_Sorbi1 GS---RKAPAKGSKKGCMTGKGGPENVNCVYRGVRQRTWGKWVAEIREPNRGRRLWLGSF
                **   ****.* *:****.*******  * * *****************.** :****:*

AT2G40350.1     SSSYEAALAYDEASKAIYGQSARLN---------------LPLL----PLCQARL-----
Sb024715_Sorbi1 PTAVEAAHAYDEAAKAMYGPKARVNFSDNSADANSGCTSALSLLASSVPVATLQRSDEKV
                .:: *** *****:**:** .**:*               *.**    *:.  :      

AT2G40350.1     ----------LHFLM-----NLKFVHVR------IQMQDLVLVRSD--------------
Sb024715_Sorbi1 ETEVESVETEVHEVKTEGNDDLGSVHVACKTVDVIQSEKSVLHKAGEVSYDYFNVEEVVE
                          :* :      :*  ***       ** :. ** ::.              

AT2G40350.1     ------------------------------
Sb024715_Sorbi1 MIIIELNADKKIEAHEEYHDGDDGFSLFAY
BoxShade v3.31 C (beta, 970507) Output
AT2G40350.1     - - - - - - - - - - - - - - - - - - - - M P R K - - - - R K S R G T R D V A E I L R K W R E Y N E Q T E A D S C I D G G
Sb024715_Sorbi1    M E L G D A T A G Q G A Q G D A A S G A L V R K K R M R R K S T G P D S I A E T I K W W K E Q N Q K L Q D E S - - - - -
 
AT2G40350.1     G S K P I R K A P P K R S R K G C M K G K G G P E N G I C D Y T G V R Q R T W G K W V A E I R E P G R G A K L W L G T F
Sb024715_Sorbi1    G S - - - R K A P A K G S K K G C M T G K G G P E N V N C V Y R G V R Q R T W G K W V A E I R E P N R G R R L W L G S F
 
AT2G40350.1     S S S Y E A A L A Y D E A S K A I Y G Q S A R L N - - - - - - - - - - - - - - - L P L L - - - - P L C Q A R L - - - - -
Sb024715_Sorbi1    P T A V E A A H A Y D E A A K A M Y G P K A R V N F S D N S A D A N S G C T S A L S L L A S S V P V A T L Q R S D E K V
 
AT2G40350.1     - - - - - - - - - - L H F L M - - - - - N L K F V H V R - - - - - - I Q M Q D L V L V R S D - - - - - - - - - - - - - -
Sb024715_Sorbi1    E T E V E S V E T E V H E V K T E G N D D L G S V H V A C K T V D V I Q S E K S V L H K A G E V S Y D Y F N V E E V V E
 
AT2G40350.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb024715_Sorbi1    M I I I E L N A D K K I E A H E E Y H D G D D G F S L F A Y
 
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