fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039052 not found in 393aa AT2G40340.1 1st_not 0.53125 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40350.1     -------------MPRKRKSR----GTRDVAEILRKWREYNEQTEADSCIDGGGSKPIRK
gm039052_Glyma1 MGAYDQVSLKPLDSSRKRKSRSRGYGTGSVAETIAKWKEYNEHLYSGK----DDSRTTRK
                              .******    ** .*** : **:****:  :..    ..*:. **

AT2G40350.1     APPKRSRKGCMKGKGGPENGICDYTGVRQRTWGKWVAEIREPGRGAKLWLGTFSSSYEAA
gm039052_Glyma1 APAKGSKKGCMKGKGGPQNSQCNYRGVRQRTWGKWVGEIREPNRGSRLWLGTFSSAQEAA
                **.* *:**********:*. *:* ***********.*****.**::********: ***

AT2G40350.1     LAYDEASKAIYGQSARLNLPLL-------------PL-----------------------
gm039052_Glyma1 LAYDEAARAMYGPCARLNFPGITDYASFKESLKESPMAASSSCSSAETATSDTTTTSNQS
                ******::*:** .****:* :             *:                       

AT2G40350.1     --CQA-------RLLH--------------------------------------------
gm039052_Glyma1 EVCAAEDVKENPRLVNVNDKVNDCHKAYEAASPTSRMKQEPKDEAVDHMVPGAGKILDVR
                  * *       **::                                            

AT2G40350.1     ------------------------------------------------------------
gm039052_Glyma1 PEGTHDAGQVAEDVNKDQMDLPWIDGFDFSDNYLNRFSTDELFQVDELLGLIDNNPIDES
                                                                            

AT2G40350.1     -FLMNLKFVHV-------------------RIQMQDLVLV--------------------
gm039052_Glyma1 ALMQSLDFGQMGFPGDGNPQVDDTLSSFIYQLQNPDAKLLGSLPHMEQTPSGFDYGLDFL
                 :: .*.* ::                   ::*  *  *:                    

AT2G40350.1     ---------------------------------RSD-
gm039052_Glyma1 KTVESGDYNGGGEEPRFLNLDDDLNPDSKGMQARKDD
                                                 *.*
BoxShade v3.31 C (beta, 970507) Output
AT2G40350.1     - - - - - - - - - - - - - M P R K R K S R - - - - G T R D V A E I L R K W R E Y N E Q T E A D S C I D G G G S K P I R K
gm039052_Glyma1    M G A Y D Q V S L K P L D S S R K R K S R S R G Y G T G S V A E T I A K W K E Y N E H L Y S G K - - - - D D S R T T R K
 
AT2G40350.1     A P P K R S R K G C M K G K G G P E N G I C D Y T G V R Q R T W G K W V A E I R E P G R G A K L W L G T F S S S Y E A A
gm039052_Glyma1    A P A K G S K K G C M K G K G G P Q N S Q C N Y R G V R Q R T W G K W V G E I R E P N R G S R L W L G T F S S A Q E A A
 
AT2G40350.1     L A Y D E A S K A I Y G Q S A R L N L P L L - - - - - - - - - - - - - P L - - - - - - - - - - - - - - - - - - - - - - -
gm039052_Glyma1    L A Y D E A A R A M Y G P C A R L N F P G I T D Y A S F K E S L K E S P M A A S S S C S S A E T A T S D T T T T S N Q S
 
AT2G40350.1     - - C Q A - - - - - - - R L L H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm039052_Glyma1    E V C A A E D V K E N P R L V N V N D K V N D C H K A Y E A A S P T S R M K Q E P K D E A V D H M V P G A G K I L D V R
 
AT2G40350.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm039052_Glyma1    P E G T H D A G Q V A E D V N K D Q M D L P W I D G F D F S D N Y L N R F S T D E L F Q V D E L L G L I D N N P I D E S
 
AT2G40350.1     - F L M N L K F V H V - - - - - - - - - - - - - - - - - - - R I Q M Q D L V L V - - - - - - - - - - - - - - - - - - - -
gm039052_Glyma1    A L M Q S L D F G Q M G F P G D G N P Q V D D T L S S F I Y Q L Q N P D A K L L G S L P H M E Q T P S G F D Y G L D F L
 
AT2G40350.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R S D -
gm039052_Glyma1    K T V E S G D Y N G G G E E P R F L N L D D D L N P D S K G M Q A R K D D
 
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