fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032270 not found in 331aa AT2G40470.1 not_1st 0.515068493 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40470.1     -------------------------------------MS----RERERFEEIGKKIKREA
Sb032270_Sorbi1 SSSVRRTLSSGTSTENLGSHLFQSTSIPFLSPQAIFFMSTASASEWPDHDELGKKIKRES
                                                     **     *   .:*:*******:

AT2G40470.1     DAWPHQMAGIRRPMSGP----------PGT-LNTITPCAACKLLRRRCAQECPFSPYFSP
Sb032270_Sorbi1 AA-ERMTAAARRSCSSPVGAGAVAGAGPGSALNTITPCAACKLLRRRCAQECPFSPYFSP
                 *  :  *. **. *.*          **: *****************************

AT2G40470.1     HEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQ
Sb032270_Sorbi1 LEPHKFAAVHKVFGASNVSKMLLEVHESQRADTANSLVYEANLRLRDPVYGCMGAILTLQ
                 ******:**************:** ******:*********:************* :**

AT2G40470.1     QQVQALQAELTAVRSEILKYKQREAV------ATLIVPSNSQVAGFHNSGGVSVIAPPPQ
Sb032270_Sorbi1 QQVQALEAELATVRAEIVRHRCRPAAVLPSSHASQLLAASAAGRGLHAGSRPSVGA----
                ******:***::**:**:::: * *.      *: ::.:.:   *:* ..  ** *    

AT2G40470.1     RPTTPPQPTTAHPPSP------SSCVF-SQPTTRDLEYGNIESEN-NYFG
Sb032270_Sorbi1 RAATLAAAAAAAAVGPVASSSSSSAVYAAAAASSSTDYSSITNENVPYFG
                *.:* . .::* . .*      **.*: : .:: . :*..* .**  ***
BoxShade v3.31 C (beta, 970507) Output
AT2G40470.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S - - - - R E R E R F E E I G K K I K R E A
Sb032270_Sorbi1    S S S V R R T L S S G T S T E N L G S H L F Q S T S I P F L S P Q A I F F M S T A S A S E W P D H D E L G K K I K R E S
 
AT2G40470.1     D A W P H Q M A G I R R P M S G P - - - - - - - - - - P G T - L N T I T P C A A C K L L R R R C A Q E C P F S P Y F S P
Sb032270_Sorbi1    A A - E R M T A A A R R S C S S P V G A G A V A G A G P G S A L N T I T P C A A C K L L R R R C A Q E C P F S P Y F S P
 
AT2G40470.1     H E P H K F A S V H K V F G A S N V S K M L M E V P E S Q R A D A A N S L V Y E A N V R L R D P V Y G C M G A I S A L Q
Sb032270_Sorbi1    L E P H K F A A V H K V F G A S N V S K M L L E V H E S Q R A D T A N S L V Y E A N L R L R D P V Y G C M G A I L T L Q
 
AT2G40470.1     Q Q V Q A L Q A E L T A V R S E I L K Y K Q R E A V - - - - - - A T L I V P S N S Q V A G F H N S G G V S V I A P P P Q
Sb032270_Sorbi1    Q Q V Q A L E A E L A T V R A E I V R H R C R P A A V L P S S H A S Q L L A A S A A G R G L H A G S R P S V G A - - - -
 
AT2G40470.1     R P T T P P Q P T T A H P P S P - - - - - - S S C V F - S Q P T T R D L E Y G N I E S E N - N Y F G
Sb032270_Sorbi1    R A A T L A A A A A A A A V G P V A S S S S S S A V Y A A A A A S S S T D Y S S I T N E N V P Y F G
 
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