fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40620.1 SSENTELKLRLQVMEQ at 209/367 in AT2G40620.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012927 not found in 329aa AT2G40620.1 not_1st 0.448051948 II
Gm040434 STENTELKLRLQAMEQ in 224/362 AT1G06850.1 1st_not 0.482142857 II
Pt014165 TTENSELKLRLQAMEQ in 179/318 AT2G40620.1 not_1st 0.467532467 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G40620.1     MEDPSNP---QPNQS-----NLSQCPPLATAPTPAPVRGP--------------YHRRAH
pt014165_POPTR_ MHDSSNS-------------DASAFP---------------------FRSS---CHRRAH
gm040434_Glyma1 MQDPSSNPNSNPNPNPHNANAASQLPR----PPPATTAGAGASSSSLFARSGGPHHRRAH
Os012927_Os03t0 MQEPKHT-------------------------DPAAMRGA--------------HHRRAR
                *.:..                                                  ****:

AT2G40620.1     SEVQFRLPED-LDLSE--PF-GG-----FDELGSEDDLFCSYMDIEKLGSGSGSASDSAG
pt014165_POPTR_ SDVPFRVTDD-LDLVP-------------DELVSEEDLFCSYMNMEKLGS-----RPEEG
gm040434_Glyma1 SEVSFRLPDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLGG-----ANGSG
Os012927_Os03t0 SEVAFRLPDD-LDL-------GGGGAGAFDEIGSEDDLFSTFMDIEKI-S-----SGPAA
                *:* **:.:* :**               :*: **:***.::::::*: .         .

AT2G40620.1     PSAPRSDNPFSAENGGAEAGNSRPRHRHSLSVDGS------------STLESIEAKKAMA
pt014165_POPTR_ PSGLKQD------NAEQEKAYVRPRHKHSNSVDGS------------SLMESIDSKKAMA
gm040434_Glyma1 ASGNGAD-----PTGETEKSPARPRHRHSSSVD---------------FGEIMDAKKAMP
Os012927_Os03t0 AGGSDRD-----RAAETS-SPPRPKHRHSSSVDGSGFFAAARKDAAASLAEVMEAKKAMT
                ...   *       .  . .  **:*:** ***                 * :::****.

AT2G40620.1     PDKLAELWVVDPKRAKRIIANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLSLF
pt014165_POPTR_ PEKLAELWALDPKRAKRIMANRQSAARSKERKARYVSELERKVHTLQTEATTLSAQLTLF
gm040434_Glyma1 PDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLY
Os012927_Os03t0 PEQLSELAAIDPKRAKRILANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLF
                *::*:** .:********:****************: ******:*************:*:

AT2G40620.1     QRDTTGLSSENTELKLRLQVMEQQAKLRDALNEQLKKEVERLKFATGEV-SPADAYNLGM
pt014165_POPTR_ QRDTSSLTTENSELKLRLQAMEQQAQLRDALNEALKKEVERLKFATGEIMTPTDSYNLGI
gm040434_Glyma1 QRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEMMSHTDSFNLGM
Os012927_Os03t0 QRDTTGLSAENAELKIRLQAMEQQAQLRDALNDALKQELERLKLATGEMTNSNETYSMGL
                ****:.*::**:***:***.*****:******: **:*:****.****: .  :::.:*:

AT2G40620.1     AHMQYQQQPQQSFFQHHHQQQTDAQNLQQMTHQFHLFQPNNNQNQSSRTNPPTAHQLMHH
pt014165_POPTR_ QHIPYNHSP---LVSPRPRPGSVDALNIQIPQ-FHPLQSN----------------LSPR
gm040434_Glyma1 HLMPFSGSN---FVPIPPQSGPSGHQNMQMPP-FGLTPST----------------MPSH
Os012927_Os03t0 QHVPYN-TP---FFPLAQHNAARQNGGTQLPPQFQPPRPN----------------VPNH
                  : :.      :.    :  .      *:.  *    ..                :  :

AT2G40620.1     ATSNAPAQSHSYSEAMHEDHLGRLQGLDISSCGRGSNFGRSD----TVSESSSTM
pt014165_POPTR_ QPGIAASHSHALSEMLPQDPLRWLQGFDISS--RSSVLVRSECPSISASEDSSL-
gm040434_Glyma1 LLHQTSSHP--YSEILQNDQLGRFQGLDISS--KGSTLVKSEGPSLSASESSTTF
Os012927_Os03t0 ML----SHPNGLQDIMQQDPLGRLQGLDI-S--KGPLVVKSESSSISASESSSTF
                      ::.   .: : :* *  :**:** *  :.. . :*:    :.**.*:
BoxShade v3.31 C (beta, 970507) Output
AT2G40620.1     M E D P S N P - - - Q P N Q S - - - - - N L S Q C P P L A T A P T P A P V R G P - - - - - - - - - - - - - - Y H R R A H
pt014165_POPTR_    M H D S S N S - - - - - - - - - - - - - D A S A F P - - - - - - - - - - - - - - - - - - - - - F R S S - - - C H R R A H
gm040434_Glyma1    M Q D P S S N P N S N P N P N P H N A N A A S Q L P R - - - - P P P A T T A G A G A S S S S L F A R S G G P H H R R A H
Os012927_Os03t0    M Q E P K H T - - - - - - - - - - - - - - - - - - - - - - - - - D P A A M R G A - - - - - - - - - - - - - - H H R R A R
 
AT2G40620.1     S E V Q F R L P E D - L D L S E - - P F - G G - - - - - F D E L G S E D D L F C S Y M D I E K L G S G S G S A S D S A G
pt014165_POPTR_    S D V P F R V T D D - L D L V P - - - - - - - - - - - - - D E L V S E E D L F C S Y M N M E K L G S - - - - - R P E E G
gm040434_Glyma1    S E V S F R L P D D M M D L S P S D P F A G G S S T A S M E E I G S E D D L F S T Y I D V D K L G G - - - - - A N G S G
Os012927_Os03t0    S E V A F R L P D D - L D L - - - - - - - G G G G A G A F D E I G S E D D L F S T F M D I E K I - S - - - - - S G P A A
 
AT2G40620.1     P S A P R S D N P F S A E N G G A E A G N S R P R H R H S L S V D G S - - - - - - - - - - - - S T L E S I E A K K A M A
pt014165_POPTR_    P S G L K Q D - - - - - - N A E Q E K A Y V R P R H K H S N S V D G S - - - - - - - - - - - - S L M E S I D S K K A M A
gm040434_Glyma1    A S G N G A D - - - - - P T G E T E K S P A R P R H R H S S S V D - - - - - - - - - - - - - - - F G E I M D A K K A M P
Os012927_Os03t0    A G G S D R D - - - - - R A A E T S - S P P R P K H R H S S S V D G S G F F A A A R K D A A A S L A E V M E A K K A M T
 
AT2G40620.1     P D K L A E L W V V D P K R A K R I I A N R Q S A A R S K E R K A R Y I L E L E R K V Q T L Q T E A T T L S A Q L S L F
pt014165_POPTR_    P E K L A E L W A L D P K R A K R I M A N R Q S A A R S K E R K A R Y V S E L E R K V H T L Q T E A T T L S A Q L T L F
gm040434_Glyma1    P D K L A E L W T I D P K R A K R I L A N R Q S A A R S K E R K A R Y I Q E L E R K V Q T L Q T E A T T L S A Q L T L Y
Os012927_Os03t0    P E Q L S E L A A I D P K R A K R I L A N R Q S A A R S K E R K A R Y I T E L E R K V Q T L Q T E A T T L S A Q L T L F
 
AT2G40620.1     Q R D T T G L S S E N T E L K L R L Q V M E Q Q A K L R D A L N E Q L K K E V E R L K F A T G E V - S P A D A Y N L G M
pt014165_POPTR_    Q R D T S S L T T E N S E L K L R L Q A M E Q Q A Q L R D A L N E A L K K E V E R L K F A T G E I M T P T D S Y N L G I
gm040434_Glyma1    Q R D T T G L S T E N T E L K L R L Q A M E Q Q A Q L R D A L N E A L K K E V E R L K V A T G E M M S H T D S F N L G M
Os012927_Os03t0    Q R D T T G L S A E N A E L K I R L Q A M E Q Q A Q L R D A L N D A L K Q E L E R L K L A T G E M T N S N E T Y S M G L
 
AT2G40620.1     A H M Q Y Q Q Q P Q Q S F F Q H H H Q Q Q T D A Q N L Q Q M T H Q F H L F Q P N N N Q N Q S S R T N P P T A H Q L M H H
pt014165_POPTR_    Q H I P Y N H S P - - - L V S P R P R P G S V D A L N I Q I P Q - F H P L Q S N - - - - - - - - - - - - - - - - L S P R
gm040434_Glyma1    H L M P F S G S N - - - F V P I P P Q S G P S G H Q N M Q M P P - F G L T P S T - - - - - - - - - - - - - - - - M P S H
Os012927_Os03t0    Q H V P Y N - T P - - - F F P L A Q H N A A R Q N G G T Q L P P Q F Q P P R P N - - - - - - - - - - - - - - - - V P N H
 
AT2G40620.1     A T S N A P A Q S H S Y S E A M H E D H L G R L Q G L D I S S C G R G S N F G R S D - - - - T V S E S S S T M
pt014165_POPTR_    Q P G I A A S H S H A L S E M L P Q D P L R W L Q G F D I S S - - R S S V L V R S E C P S I S A S E D S S L -
gm040434_Glyma1    L L H Q T S S H P - - Y S E I L Q N D Q L G R F Q G L D I S S - - K G S T L V K S E G P S L S A S E S S T T F
Os012927_Os03t0    M L - - - - S H P N G L Q D I M Q Q D P L G R L Q G L D I - S - - K G P L V V K S E S S S I S A S E S S S T F
 
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