fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40620.1 SSENTELKLRLQVMEQ at 209/367 in AT2G40620.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012928 not found in 329aa AT2G40620.1 1st_1st 0.448051948 Ia
Sb024339 not found in 380aa AT2G40620.1 1st_1st 0.415584415 Ia
Pt014180 STENTELKLRLQAMEQ in 241/379 AT2G40620.1 1st_1st 0.488636363 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G40620.1     -------MEDPSNPQPNQS------NLSQCPPLATAP--TPAPV------------RGPY
pt014180_POPTR_ METRDPLSKPPQNSDPPKP--------NNPNPNPTV---SPSSSSSSSSSMFNNIRGGAH
Sb024339_Sorbi1 ADLPVAMAMPPKPGDPPQRSPGRSPNLNLPCPLPPVPGGAPAPPPQHQPGAGLPPPRVGH
Os012928_Os03t0 -------MQEPKHTDPAAM-------------------------------------RGAH
                          *.  :*                                           :

AT2G40620.1     HRRAHSEVQFRLPED-----LDLSEP----FGGFDELGSEDDLFCSYMDIEKL-------
pt014180_POPTR_ HRRAHSEMSFRLPEDMTMMMMDLHPSDQINGGSLEEIGSEDDLFSTYIDVDKLTGGNNGN
Sb024339_Sorbi1 HRRARSEVAFRFPD-------DLAGA---GAGGFDEIGSEDDLFSTFMDMDKIA------
Os012928_Os03t0 HRRARSEVAFRLPDD-----LDLGGG---GAGAFDEIGSEDDLFSTFMDIEKISS-----
                ****:**: **:*:       **        *.::*:*******.:::*::*:       

AT2G40620.1     GSGSGSASDSA----GPSAPRSDNPFSAENGGAEAGNSRP-RHRHSLSVDGSST------
pt014180_POPTR_ GTGVGNQNDNDNTINGEKGGVSDSGPG-------SGTSRP-KHRHSYSVDGSVFGG----
Sb024339_Sorbi1 ------GADRD------RAAETSSPP------------RPAKHRHSASFDGFGMGAGAGG
Os012928_Os03t0 GPAAAGGSDRD------RAAETSSPP------------RP-KHRHSSSVDGSGFFAAA--
                        *         .  :..              ** :**** *.**         

AT2G40620.1     ------------LESIEAKKAMAPDKLAELWVVDPKRAKRIIANRQSAARSKERKARYIL
pt014180_POPTR_ ------------GEVMEAKKAMPPNKLAELWSIDPKRAKRILANRQSAARSKERKARYIL
Sb024339_Sorbi1 PGGQQDGGGGVFGEVMEAKKAMSSEQLAELAAIDPKRAKRIIANRQSAARSKERKARYIT
Os012928_Os03t0 ---RKDAAASL-AEVMEAKKAMTPEQLSELAAIDPKRAKRILANRQSAARSKERKARYIT
                             * :******..::*:**  :********:***************** 

AT2G40620.1     ELERKVQTLQTEATTLSAQLSLFQRDTTGLSSENTELKLRLQVMEQQAKLRDALNEQLKK
pt014180_POPTR_ ELERKVQTLQTEATTLSAQLSLFQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKK
Sb024339_Sorbi1 ELERKVQTLQTEATTLSAQLTLFQRDTTGLSAENAELKIRLQAMEQQAQLRDALNDALKQ
Os012928_Os03t0 ELERKVQTLQTEATTLSAQLTLFQRDTTGLSAENAELKIRLQAMEQQAQLRDALNDALKQ
                ********************:**********:**:***:***.*****:******: **:

AT2G40620.1     EVERLKFATGEV-SPADAYNLGMAHMQYQQQPQQSFFQHHHQQQTDAQNLQQMTHQFHLF
pt014180_POPTR_ EVGRLKIATGEMLSPSDSYNLGMHQMPFTPS---NFFPLPSQPGPAGHPNMQLPSFTHSP
Sb024339_Sorbi1 EVERLKIATGEMSKSNEQFNMGMQHISYSPS----FFQLSEQHTVQQHGNIQLPHHFQQP
Os012928_Os03t0 ELERLKLATGEMTNSNETYSMGLQHVPYNTP----FFPLAQHNAARQNGGTQLPPQFQPP
                *: ***:****: .. : :.:*: :: :       **    :     :   *:.   :  

AT2G40620.1     QPNNNQNQSSRTNPPTAHQLMHHATSNAPAQSHSYSEAMHEDHLGRLQGLDISSCGRGSN
pt014180_POPTR_ SSMS-----------TRHIHQVD--------SQSLSDYMQNDPIGRLQGLDISN--KGSH
Sb024339_Sorbi1 PPNV-----------PSHQMLSH--------PNSLSDMMQQDSLGRLQGLDIG---KGSM
Os012928_Os03t0 RPNV-----------PNH-MLSH--------PNGLQDIMQQDPLGRLQGLDIS---KGPL
                 .             . *    .        .:. .: *::* :********.   :*. 

AT2G40620.1     F------------GRSDTVSESSSTM
pt014180_POPTR_ --------IVKSEGPSLSASESSTTF
Sb024339_Sorbi1 AVKSEAEVVVKSEGSSISAGESNTTF
Os012928_Os03t0 --------VVKSESSSISASESSSTF
                             . * :..**.:*:
BoxShade v3.31 C (beta, 970507) Output
AT2G40620.1     - - - - - - - M E D P S N P Q P N Q S - - - - - - N L S Q C P P L A T A P - - T P A P V - - - - - - - - - - - - R G P Y
pt014180_POPTR_    M E T R D P L S K P P Q N S D P P K P - - - - - - - - N N P N P N P T V - - - S P S S S S S S S S S M F N N I R G G A H
Sb024339_Sorbi1    A D L P V A M A M P P K P G D P P Q R S P G R S P N L N L P C P L P P V P G G A P A P P P Q H Q P G A G L P P P R V G H
Os012928_Os03t0    - - - - - - - M Q E P K H T D P A A M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R G A H
 
AT2G40620.1     H R R A H S E V Q F R L P E D - - - - - L D L S E P - - - - F G G F D E L G S E D D L F C S Y M D I E K L - - - - - - -
pt014180_POPTR_    H R R A H S E M S F R L P E D M T M M M M D L H P S D Q I N G G S L E E I G S E D D L F S T Y I D V D K L T G G N N G N
Sb024339_Sorbi1    H R R A R S E V A F R F P D - - - - - - - D L A G A - - - G A G G F D E I G S E D D L F S T F M D M D K I A - - - - - -
Os012928_Os03t0    H R R A R S E V A F R L P D D - - - - - L D L G G G - - - G A G A F D E I G S E D D L F S T F M D I E K I S S - - - - -
 
AT2G40620.1     G S G S G S A S D S A - - - - G P S A P R S D N P F S A E N G G A E A G N S R P - R H R H S L S V D G S S T - - - - - -
pt014180_POPTR_    G T G V G N Q N D N D N T I N G E K G G V S D S G P G - - - - - - - S G T S R P - K H R H S Y S V D G S V F G G - - - -
Sb024339_Sorbi1    - - - - - - G A D R D - - - - - - R A A E T S S P P - - - - - - - - - - - - R P A K H R H S A S F D G F G M G A G A G G
Os012928_Os03t0    G P A A A G G S D R D - - - - - - R A A E T S S P P - - - - - - - - - - - - R P - K H R H S S S V D G S G F F A A A - -
 
AT2G40620.1     - - - - - - - - - - - - L E S I E A K K A M A P D K L A E L W V V D P K R A K R I I A N R Q S A A R S K E R K A R Y I L
pt014180_POPTR_    - - - - - - - - - - - - G E V M E A K K A M P P N K L A E L W S I D P K R A K R I L A N R Q S A A R S K E R K A R Y I L
Sb024339_Sorbi1    P G G Q Q D G G G G V F G E V M E A K K A M S S E Q L A E L A A I D P K R A K R I I A N R Q S A A R S K E R K A R Y I T
Os012928_Os03t0    - - - R K D A A A S L - A E V M E A K K A M T P E Q L S E L A A I D P K R A K R I L A N R Q S A A R S K E R K A R Y I T
 
AT2G40620.1     E L E R K V Q T L Q T E A T T L S A Q L S L F Q R D T T G L S S E N T E L K L R L Q V M E Q Q A K L R D A L N E Q L K K
pt014180_POPTR_    E L E R K V Q T L Q T E A T T L S A Q L S L F Q R D T T G L S T E N T E L K L R L Q A M E Q Q A Q L R D A L N E A L K K
Sb024339_Sorbi1    E L E R K V Q T L Q T E A T T L S A Q L T L F Q R D T T G L S A E N A E L K I R L Q A M E Q Q A Q L R D A L N D A L K Q
Os012928_Os03t0    E L E R K V Q T L Q T E A T T L S A Q L T L F Q R D T T G L S A E N A E L K I R L Q A M E Q Q A Q L R D A L N D A L K Q
 
AT2G40620.1     E V E R L K F A T G E V - S P A D A Y N L G M A H M Q Y Q Q Q P Q Q S F F Q H H H Q Q Q T D A Q N L Q Q M T H Q F H L F
pt014180_POPTR_    E V G R L K I A T G E M L S P S D S Y N L G M H Q M P F T P S - - - N F F P L P S Q P G P A G H P N M Q L P S F T H S P
Sb024339_Sorbi1    E V E R L K I A T G E M S K S N E Q F N M G M Q H I S Y S P S - - - - F F Q L S E Q H T V Q Q H G N I Q L P H H F Q Q P
Os012928_Os03t0    E L E R L K L A T G E M T N S N E T Y S M G L Q H V P Y N T P - - - - F F P L A Q H N A A R Q N G G T Q L P P Q F Q P P
 
AT2G40620.1     Q P N N N Q N Q S S R T N P P T A H Q L M H H A T S N A P A Q S H S Y S E A M H E D H L G R L Q G L D I S S C G R G S N
pt014180_POPTR_    S S M S - - - - - - - - - - - T R H I H Q V D - - - - - - - - S Q S L S D Y M Q N D P I G R L Q G L D I S N - - K G S H
Sb024339_Sorbi1    P P N V - - - - - - - - - - - P S H Q M L S H - - - - - - - - P N S L S D M M Q Q D S L G R L Q G L D I G - - - K G S M
Os012928_Os03t0    R P N V - - - - - - - - - - - P N H - M L S H - - - - - - - - P N G L Q D I M Q Q D P L G R L Q G L D I S - - - K G P L
 
AT2G40620.1     F - - - - - - - - - - - - G R S D T V S E S S S T M
pt014180_POPTR_    - - - - - - - - I V K S E G P S L S A S E S S T T F
Sb024339_Sorbi1    A V K S E A E V V V K S E G S S I S A G E S N T T F
Os012928_Os03t0    - - - - - - - - V V K S E S S S I S A S E S S S T F
 
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