fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40620.1 SSENTELKLRLQVMEQ at 209/367 in AT2G40620.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014165 TTENSELKLRLQAMEQ in 179/318 AT2G40620.1 not_1st 0.467532467 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40620.1     MEDPSNPQPNQSNLSQCPPLATAPTPAPVRGPYHRRAHSEVQFRLPEDLDLSEPFGGFDE
pt014165_POPTR_ MHDSSN---------------SDASAFPFRSSCHRRAHSDVPFRVTDDLDLVP-----DE
                *.*.**               : .:. *.*.. ******:* **:.:****       **

AT2G40620.1     LGSEDDLFCSYMDIEKLGSGSGSASDSAGPSAPRSDNPFSAENGGAEAGNSRPRHRHSLS
pt014165_POPTR_ LVSEEDLFCSYMNMEKLGS-----RPEEGPSGLKQDN---AEQ---EKAYVRPRHKHSNS
                * **:*******::*****       . ***. :.**   **:   * .  ****:** *

AT2G40620.1     VDGSSTLESIEAKKAMAPDKLAELWVVDPKRAKRIIANRQSAARSKERKARYILELERKV
pt014165_POPTR_ VDGSSLMESIDSKKAMAPEKLAELWALDPKRAKRIMANRQSAARSKERKARYVSELERKV
                ***** :***::******:******.:********:****************: ******

AT2G40620.1     QTLQTEATTLSAQLSLFQRDTTGLSSENTELKLRLQVMEQQAKLRDALNEQLKKEVERLK
pt014165_POPTR_ HTLQTEATTLSAQLTLFQRDTSSLTTENSELKLRLQAMEQQAQLRDALNEALKKEVERLK
                :*************:******:.*::**:*******.*****:******* *********

AT2G40620.1     FATGEV-SPADAYNLGMAHMQYQQQPQQSFFQHHHQQQTDAQNLQQMTHQFHLFQPNNNQ
pt014165_POPTR_ FATGEIMTPTDSYNLGIQHIPYNHSPLVS--PRPRPGSVDALNIQ--IPQFHPLQSNLSP
                *****: :*:*:****: *: *::.*  *   : :  ..** *:*    *** :*.* . 

AT2G40620.1     NQSSRTNPPTAHQLMHHATSNAPAQSHSYSEAMHEDHLGRLQGLDISSCGRGSNFGRSD-
pt014165_POPTR_ RQPGI----------------AASHSHALSEMLPQDPLRWLQGFDISS--RSSVLVRSEC
                .*..                 *.::**: ** : :* *  ***:****  *.* : **: 

AT2G40620.1     ---TVSESSSTM
pt014165_POPTR_ PSISASEDSSL-
                   :.**.**
BoxShade v3.31 C (beta, 970507) Output
AT2G40620.1     M E D P S N P Q P N Q S N L S Q C P P L A T A P T P A P V R G P Y H R R A H S E V Q F R L P E D L D L S E P F G G F D E
pt014165_POPTR_    M H D S S N - - - - - - - - - - - - - - - S D A S A F P F R S S C H R R A H S D V P F R V T D D L D L V P - - - - - D E
 
AT2G40620.1     L G S E D D L F C S Y M D I E K L G S G S G S A S D S A G P S A P R S D N P F S A E N G G A E A G N S R P R H R H S L S
pt014165_POPTR_    L V S E E D L F C S Y M N M E K L G S - - - - - R P E E G P S G L K Q D N - - - A E Q - - - E K A Y V R P R H K H S N S
 
AT2G40620.1     V D G S S T L E S I E A K K A M A P D K L A E L W V V D P K R A K R I I A N R Q S A A R S K E R K A R Y I L E L E R K V
pt014165_POPTR_    V D G S S L M E S I D S K K A M A P E K L A E L W A L D P K R A K R I M A N R Q S A A R S K E R K A R Y V S E L E R K V
 
AT2G40620.1     Q T L Q T E A T T L S A Q L S L F Q R D T T G L S S E N T E L K L R L Q V M E Q Q A K L R D A L N E Q L K K E V E R L K
pt014165_POPTR_    H T L Q T E A T T L S A Q L T L F Q R D T S S L T T E N S E L K L R L Q A M E Q Q A Q L R D A L N E A L K K E V E R L K
 
AT2G40620.1     F A T G E V - S P A D A Y N L G M A H M Q Y Q Q Q P Q Q S F F Q H H H Q Q Q T D A Q N L Q Q M T H Q F H L F Q P N N N Q
pt014165_POPTR_    F A T G E I M T P T D S Y N L G I Q H I P Y N H S P L V S - - P R P R P G S V D A L N I Q - - I P Q F H P L Q S N L S P
 
AT2G40620.1     N Q S S R T N P P T A H Q L M H H A T S N A P A Q S H S Y S E A M H E D H L G R L Q G L D I S S C G R G S N F G R S D -
pt014165_POPTR_    R Q P G I - - - - - - - - - - - - - - - - A A S H S H A L S E M L P Q D P L R W L Q G F D I S S - - R S S V L V R S E C
 
AT2G40620.1     - - - T V S E S S S T M
pt014165_POPTR_    P S I S A S E D S S L -
 
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