fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40620.1 SSENTELKLRLQVMEQ at 209/367 in AT2G40620.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013863 SSENTELKLRLQAMEQ in 237/375 AT1G06850.1 not_not 0.474025974 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40620.1     ------MEDPSNPQPNQSNLSQCPPLATAPTPAPVR--------GPYHRRAHSEVQFRLP
pt013863_POPTR_ MSSSMETQDPQSKPPQNSDPTK--PHNPNPTTPPASSMLNNIRGGALHRRARSEMSFRLP
                       :**..  *::*: ::  *  . **..*.         *. ****:**:.****

AT2G40620.1     EDLDL-------SEPF------GGFDELGSEDDLFCSYMDIEKLGSGSGSASDSAGPSAP
pt013863_POPTR_ EDMTMMMMDIHPSDQINGGNGNGSLEEIGSEDDLFSTYIDVDKL-TGGNSGNGAGGGVQN
                **: :       *: :      *.::*:*******.:*:*::** :*..*...:.*    

AT2G40620.1     RSDNPFSAENGGAE-AGNSRPRHRHSLSVDGS--STLESIEAKKAMAPDKLAELWVVDPK
pt013863_POPTR_ DNDNNMNGEKAGVSGSGTSRPKHRHSNSVDGSVFGGGEVMDAKKAMPPDKLAELWNIDPK
                 .** :..*:.*.. :*.***:**** *****  .  * ::*****.******** :***

AT2G40620.1     RAKRIIANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLSLFQRDTTGLSSENTE
pt013863_POPTR_ RAKRILANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLTLFQRDTTGLSSENTE
                *****:**************************************:***************

AT2G40620.1     LKLRLQVMEQQAKLRDALNEQLKKEVERLKFATGE-VSPADAYNLGMAHMQYQQ------
pt013863_POPTR_ LKLRLQAMEQQAQLRDALNEALKKEVERLRIATGEMVSPSESFNLGMHQMPFTQPNFFPL
                ******.*****:******* ********::**** ***::::**** :* : *      

AT2G40620.1     QPQQSFFQHHHQQQTDAQNLQQMTHQFHLFQPNNNQNQSSRTNPPTAHQLMHHATSNAPA
pt013863_POPTR_ PPQPGSSGHPNMQ------LPSFTH-----------------TPPSMS--THHLQQ---A
                 ** .   * : *      * .:**                 .**:     **  .   *

AT2G40620.1     QSHSYSEAMHEDHLGRLQGLDISSCGRGSNFGRSD----TVSESSSTM
pt013863_POPTR_ DSHNLSDYMQNDPIRQLQGLDISN--KGLNIVKSEGPSLSASENSSTF
                :**. *: *::* : :*******.  :* *: :*:    :.**.***:
BoxShade v3.31 C (beta, 970507) Output
AT2G40620.1     - - - - - - M E D P S N P Q P N Q S N L S Q C P P L A T A P T P A P V R - - - - - - - - G P Y H R R A H S E V Q F R L P
pt013863_POPTR_    M S S S M E T Q D P Q S K P P Q N S D P T K - - P H N P N P T T P P A S S M L N N I R G G A L H R R A R S E M S F R L P
 
AT2G40620.1     E D L D L - - - - - - - S E P F - - - - - - G G F D E L G S E D D L F C S Y M D I E K L G S G S G S A S D S A G P S A P
pt013863_POPTR_    E D M T M M M M D I H P S D Q I N G G N G N G S L E E I G S E D D L F S T Y I D V D K L - T G G N S G N G A G G G V Q N
 
AT2G40620.1     R S D N P F S A E N G G A E - A G N S R P R H R H S L S V D G S - - S T L E S I E A K K A M A P D K L A E L W V V D P K
pt013863_POPTR_    D N D N N M N G E K A G V S G S G T S R P K H R H S N S V D G S V F G G G E V M D A K K A M P P D K L A E L W N I D P K
 
AT2G40620.1     R A K R I I A N R Q S A A R S K E R K A R Y I L E L E R K V Q T L Q T E A T T L S A Q L S L F Q R D T T G L S S E N T E
pt013863_POPTR_    R A K R I L A N R Q S A A R S K E R K A R Y I L E L E R K V Q T L Q T E A T T L S A Q L T L F Q R D T T G L S S E N T E
 
AT2G40620.1     L K L R L Q V M E Q Q A K L R D A L N E Q L K K E V E R L K F A T G E - V S P A D A Y N L G M A H M Q Y Q Q - - - - - -
pt013863_POPTR_    L K L R L Q A M E Q Q A Q L R D A L N E A L K K E V E R L R I A T G E M V S P S E S F N L G M H Q M P F T Q P N F F P L
 
AT2G40620.1     Q P Q Q S F F Q H H H Q Q Q T D A Q N L Q Q M T H Q F H L F Q P N N N Q N Q S S R T N P P T A H Q L M H H A T S N A P A
pt013863_POPTR_    P P Q P G S S G H P N M Q - - - - - - L P S F T H - - - - - - - - - - - - - - - - - T P P S M S - - T H H L Q Q - - - A
 
AT2G40620.1     Q S H S Y S E A M H E D H L G R L Q G L D I S S C G R G S N F G R S D - - - - T V S E S S S T M
pt013863_POPTR_    D S H N L S D Y M Q N D P I R Q L Q G L D I S N - - K G L N I V K S E G P S L S A S E N S S T F
 
0