fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40620.1 SSENTELKLRLQVMEQ at 209/367 in AT2G40620.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014180 STENTELKLRLQAMEQ in 241/379 AT2G40620.1 1st_1st 0.488636363 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40620.1     ME--DPSNPQPNQSNLSQCPPLATAPTPAPVRGP------------------YHRRAHSE
pt014180_POPTR_ METRDPLSKPPQNSD----PPKPNNPNPNPTVSPSSSSSSSSSMFNNIRGGAHHRRAHSE
                **  ** .  *::*:    ** .. *.* *. .*                  :*******

AT2G40620.1     VQFRLPEDLDL-------SEPF--GGFDELGSEDDLFCSYMDIEKL-------GSGSGSA
pt014180_POPTR_ MSFRLPEDMTMMMMDLHPSDQINGGSLEEIGSEDDLFSTYIDVDKLTGGNNGNGTGVGNQ
                :.******: :       *: :  *.::*:*******.:*:*::**       *:* *. 

AT2G40620.1     SDSAGPSAPRSDNPFSAENGGAE-----AGNSRPRHRHSLSVDGS--STLESIEAKKAMA
pt014180_POPTR_ ND--------NDNTINGEKGGVSDSGPGSGTSRPKHRHSYSVDGSVFGGGEVMEAKKAMP
                .*        .**.:..*:**..     :*.***:**** *****  .  * :******.

AT2G40620.1     PDKLAELWVVDPKRAKRIIANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLSLF
pt014180_POPTR_ PNKLAELWSIDPKRAKRILANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLSLF
                *:****** :********:*****************************************

AT2G40620.1     QRDTTGLSSENTELKLRLQVMEQQAKLRDALNEQLKKEVERLKFATGE-VSPADAYNLGM
pt014180_POPTR_ QRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVGRLKIATGEMLSPSDSYNLGM
                ********:**********.*****:******* ***** ***:**** :**:*:*****

AT2G40620.1     AHMQYQQQ-----PQQSFFQHHHQQQTDAQNLQQMTHQFHLFQPNNNQNQSSRTNPPTAH
pt014180_POPTR_ HQMPFTPSNFFPLPSQPGPAGHPNMQ-----LPSFTH-----SPS---SMSTR----HIH
                 :* :  .     *.*.    * : *     * .:**     .*.   . *:*      *

AT2G40620.1     QLMHHATSNAPAQSHSYSEAMHEDHLGRLQGLDISSCGRGSNFGRSD----TVSESSSTM
pt014180_POPTR_ QV----------DSQSLSDYMQNDPIGRLQGLDISN--KGSHIVKSEGPSLSASESSTTF
                *:          :*:* *: *::* :*********.  :**:: :*:    :.****:*:
BoxShade v3.31 C (beta, 970507) Output
AT2G40620.1     M E - - D P S N P Q P N Q S N L S Q C P P L A T A P T P A P V R G P - - - - - - - - - - - - - - - - - - Y H R R A H S E
pt014180_POPTR_    M E T R D P L S K P P Q N S D - - - - P P K P N N P N P N P T V S P S S S S S S S S S M F N N I R G G A H H R R A H S E
 
AT2G40620.1     V Q F R L P E D L D L - - - - - - - S E P F - - G G F D E L G S E D D L F C S Y M D I E K L - - - - - - - G S G S G S A
pt014180_POPTR_    M S F R L P E D M T M M M M D L H P S D Q I N G G S L E E I G S E D D L F S T Y I D V D K L T G G N N G N G T G V G N Q
 
AT2G40620.1     S D S A G P S A P R S D N P F S A E N G G A E - - - - - A G N S R P R H R H S L S V D G S - - S T L E S I E A K K A M A
pt014180_POPTR_    N D - - - - - - - - N D N T I N G E K G G V S D S G P G S G T S R P K H R H S Y S V D G S V F G G G E V M E A K K A M P
 
AT2G40620.1     P D K L A E L W V V D P K R A K R I I A N R Q S A A R S K E R K A R Y I L E L E R K V Q T L Q T E A T T L S A Q L S L F
pt014180_POPTR_    P N K L A E L W S I D P K R A K R I L A N R Q S A A R S K E R K A R Y I L E L E R K V Q T L Q T E A T T L S A Q L S L F
 
AT2G40620.1     Q R D T T G L S S E N T E L K L R L Q V M E Q Q A K L R D A L N E Q L K K E V E R L K F A T G E - V S P A D A Y N L G M
pt014180_POPTR_    Q R D T T G L S T E N T E L K L R L Q A M E Q Q A Q L R D A L N E A L K K E V G R L K I A T G E M L S P S D S Y N L G M
 
AT2G40620.1     A H M Q Y Q Q Q - - - - - P Q Q S F F Q H H H Q Q Q T D A Q N L Q Q M T H Q F H L F Q P N N N Q N Q S S R T N P P T A H
pt014180_POPTR_    H Q M P F T P S N F F P L P S Q P G P A G H P N M Q - - - - - L P S F T H - - - - - S P S - - - S M S T R - - - - H I H
 
AT2G40620.1     Q L M H H A T S N A P A Q S H S Y S E A M H E D H L G R L Q G L D I S S C G R G S N F G R S D - - - - T V S E S S S T M
pt014180_POPTR_    Q V - - - - - - - - - - D S Q S L S D Y M Q N D P I G R L Q G L D I S N - - K G S H I V K S E G P S L S A S E S S T T F
 
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