fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40620.1 SSENTELKLRLQVMEQ at 209/367 in AT2G40620.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm040434 STENTELKLRLQAMEQ in 224/362 AT1G06850.1 1st_not 0.482142857 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40620.1     MEDP-----SNPQPNQSN------LSQCPPLATAPTPAPVR-------GPYHRRAHSEVQ
gm040434_Glyma1 MQDPSSNPNSNPNPNPHNANAASQLPRPPPATTAGAGASSSSLFARSGGPHHRRAHSEVS
                *:**     ***:**  *      *.: ** :** : *.         **:********.

AT2G40620.1     FRLPED-LDL--SEPFGG------FDELGSEDDLFCSYMDIEKLG--SGSGSASDSAGPS
gm040434_Glyma1 FRLPDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLGGANGSGASGNGADPT
                ****:* :**  *:**.*      ::*:*******.:*:*::***  .***::.:.*.*:

AT2G40620.1     APRSDNPFSAENGGAEAGNSRPRHRHSLSVDGSSTLESIEAKKAMAPDKLAELWVVDPKR
gm040434_Glyma1 ------------GETEKSPARPRHRHSSSVDFG---EIMDAKKAMPPDKLAELWTIDPKR
                            * :* . :******* *** .   * ::*****.********.:****

AT2G40620.1     AKRIIANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLSLFQRDTTGLSSENTEL
gm040434_Glyma1 AKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTEL
                ****:***************** ********************:*:********:*****

AT2G40620.1     KLRLQVMEQQAKLRDALNEQLKKEVERLKFATGE-VSPADAYNLGMAHMQYQQQ-----P
gm040434_Glyma1 KLRLQAMEQQAQLRDALNEALKKEVERLKVATGEMMSHTDSFNLGMHLMPFSGSNFVPIP
                *****.*****:******* *********.**** :* :*::****  * :. .     *

AT2G40620.1     QQSFFQHHHQQQTDAQNLQQMTHQFHLFQPNNNQNQSSRTNPPTAHQLMHHATSNAPAQS
gm040434_Glyma1 PQSGPSGHQNMQMPPFGLTPSTMPSHLL----------------------HQTS-----S
                 **  . *:: *  . .*   *   **:                      * **     *

AT2G40620.1     HSYSEAMHEDHLGRLQGLDISSCGRGSNFGRSD----TVSESSSTM
gm040434_Glyma1 HPYSEILQNDQLGRFQGLDISS--KGSTLVKSEGPSLSASESSTTF
                *.*** :::*:***:*******  :**.: :*:    :.****:*:
BoxShade v3.31 C (beta, 970507) Output
AT2G40620.1     M E D P - - - - - S N P Q P N Q S N - - - - - - L S Q C P P L A T A P T P A P V R - - - - - - - G P Y H R R A H S E V Q
gm040434_Glyma1    M Q D P S S N P N S N P N P N P H N A N A A S Q L P R P P P A T T A G A G A S S S S L F A R S G G P H H R R A H S E V S
 
AT2G40620.1     F R L P E D - L D L - - S E P F G G - - - - - - F D E L G S E D D L F C S Y M D I E K L G - - S G S G S A S D S A G P S
gm040434_Glyma1    F R L P D D M M D L S P S D P F A G G S S T A S M E E I G S E D D L F S T Y I D V D K L G G A N G S G A S G N G A D P T
 
AT2G40620.1     A P R S D N P F S A E N G G A E A G N S R P R H R H S L S V D G S S T L E S I E A K K A M A P D K L A E L W V V D P K R
gm040434_Glyma1    - - - - - - - - - - - - G E T E K S P A R P R H R H S S S V D F G - - - E I M D A K K A M P P D K L A E L W T I D P K R
 
AT2G40620.1     A K R I I A N R Q S A A R S K E R K A R Y I L E L E R K V Q T L Q T E A T T L S A Q L S L F Q R D T T G L S S E N T E L
gm040434_Glyma1    A K R I L A N R Q S A A R S K E R K A R Y I Q E L E R K V Q T L Q T E A T T L S A Q L T L Y Q R D T T G L S T E N T E L
 
AT2G40620.1     K L R L Q V M E Q Q A K L R D A L N E Q L K K E V E R L K F A T G E - V S P A D A Y N L G M A H M Q Y Q Q Q - - - - - P
gm040434_Glyma1    K L R L Q A M E Q Q A Q L R D A L N E A L K K E V E R L K V A T G E M M S H T D S F N L G M H L M P F S G S N F V P I P
 
AT2G40620.1     Q Q S F F Q H H H Q Q Q T D A Q N L Q Q M T H Q F H L F Q P N N N Q N Q S S R T N P P T A H Q L M H H A T S N A P A Q S
gm040434_Glyma1    P Q S G P S G H Q N M Q M P P F G L T P S T M P S H L L - - - - - - - - - - - - - - - - - - - - - - H Q T S - - - - - S
 
AT2G40620.1     H S Y S E A M H E D H L G R L Q G L D I S S C G R G S N F G R S D - - - - T V S E S S S T M
gm040434_Glyma1    H P Y S E I L Q N D Q L G R F Q G L D I S S - - K G S T L V K S E G P S L S A S E S S T T F
 
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