fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40620.1 SSENTELKLRLQVMEQ at 209/367 in AT2G40620.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031558 SSENTELKLRLQAMEQ in 247/385 AT1G06850.1 not_not 0.470779220 III
Gm004901 STENTELKLRLQAMEQ in 226/364 AT1G06850.1 not_not 0.467532467 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G40620.1     MEDP-----SNPQPNQ---SNLSQCP--PLATAPTP---------------------APV
gm031558_Glyma1 MATQTQDPPSNPNPNP---NATSATP---------------SSSFFFRAGGANGASVAPV
gm004901_Glyma0 MQDPSSNPNSNPNPNPHNANAASQLPRPPQATASTAVAGAFSSSLFARSGG---------
                *        ***:**    .  *  *                                  

AT2G40620.1     RG-----PYHRRAHSEVQFRLPED-LDL--SEPFGG------FDELGSEDDLFCSYMDIE
gm031558_Glyma1 AGSGESHSHHRRAQSEVSFRLPEDMMDLSPSDPFNGGSSTASFEEIGSEDDLFSTYIDVE
gm004901_Glyma0 -------PHHRRAHSEMSFRLPDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVD
                       .:****:**:.****:* :**  *:** *      ::*:*******.:*:*::

AT2G40620.1     KLG---SGSGSASDSAGPSAPRSDNPFSAENGGAEAGN---SRPRHRHSLSVDGSSTL--
gm031558_Glyma1 KLSGGANGAGRGGNGSDQSGYGNGAGTSGHNDGEKSSSAAAARPRHRHSSSVDGSTSTCM
gm004901_Glyma0 KLS-GANGSGGAGNGADPTG-----------EREKSP----ARPRHRQSSSVD-------
                **.   .*:* ..:.:. :.              ::     :*****:* ***       

AT2G40620.1     --ESIEAKKAMAPDKLAELWVVDPKRAKRIIANRQSAARSKERKARYILELERKVQTLQT
gm031558_Glyma1 FGEIMDAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYIQELEHKVQTLQT
gm004901_Glyma0 FGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQT
                  * ::*****.******** :********:***************** ***:*******

AT2G40620.1     EATTLSAQLSLFQRDTTGLSSENTELKLRLQVMEQQAKLRDALNEQLKKEVERLKFATGE
gm031558_Glyma1 EATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGE
gm004901_Glyma0 EATTLSAQLTLYQRDTSGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGE
                *********:*:****:***:**********.*****:******: * *******.****

AT2G40620.1     -VSPADAYNLGMAHMQYQQQ-----PQQSFFQHHHQQQTDAQNLQQMTHQFHLFQPNNNQ
gm031558_Glyma1 ALNQSESFNLGMHQMPYAGPNFFSIPPHSGPSGH-------QNMQ---------LPPFGH
gm004901_Glyma0 GMSHTESFNLGMHQMPFSGSNFIPIPPQSGPSGH-------QNMQ---------MPPFGH
                 :. ::::**** :* :        * :*  . *       **:*          *  .:

AT2G40620.1     NQSSRTNPPTAHQLMHHATSNAPAQSHSYSEAMHEDHLGRLQGLDISSCGRGSNFGRSD-
gm031558_Glyma1 SQSTV---PT-HQL--QQTN-----SHQMSDILQNDQLGRLQGLDISS--KGTPMVKSEG
gm004901_Glyma0 SPSTM---PT-HQL--HQTS-----SHPYSEILQNEQLGRFQGLDISS--KGSTLVKSEG
                . *:    ** ***  : *.     **  *: :::::***:*******  :*: : :*: 

AT2G40620.1     ---TVSESSSTM
gm031558_Glyma1 PSISANESSTTF
gm004901_Glyma0 PSLSASESSSTF
                   :..***:*:
BoxShade v3.31 C (beta, 970507) Output
AT2G40620.1     M E D P - - - - - S N P Q P N Q - - - S N L S Q C P - - P L A T A P T P - - - - - - - - - - - - - - - - - - - - - A P V
gm031558_Glyma1    M A T Q T Q D P P S N P N P N P - - - N A T S A T P - - - - - - - - - - - - - - - S S S F F F R A G G A N G A S V A P V
gm004901_Glyma0    M Q D P S S N P N S N P N P N P H N A N A A S Q L P R P P Q A T A S T A V A G A F S S S L F A R S G G - - - - - - - - -
 
AT2G40620.1     R G - - - - - P Y H R R A H S E V Q F R L P E D - L D L - - S E P F G G - - - - - - F D E L G S E D D L F C S Y M D I E
gm031558_Glyma1    A G S G E S H S H H R R A Q S E V S F R L P E D M M D L S P S D P F N G G S S T A S F E E I G S E D D L F S T Y I D V E
gm004901_Glyma0    - - - - - - - P H H R R A H S E M S F R L P D D M M D L S P S D P F A G G S S T A S M E E I G S E D D L F S T Y I D V D
 
AT2G40620.1     K L G - - - S G S G S A S D S A G P S A P R S D N P F S A E N G G A E A G N - - - S R P R H R H S L S V D G S S T L - -
gm031558_Glyma1    K L S G G A N G A G R G G N G S D Q S G Y G N G A G T S G H N D G E K S S S A A A A R P R H R H S S S V D G S T S T C M
gm004901_Glyma0    K L S - G A N G S G G A G N G A D P T G - - - - - - - - - - - E R E K S P - - - - A R P R H R Q S S S V D - - - - - - -
 
AT2G40620.1     - - E S I E A K K A M A P D K L A E L W V V D P K R A K R I I A N R Q S A A R S K E R K A R Y I L E L E R K V Q T L Q T
gm031558_Glyma1    F G E I M D A K K A M P P D K L A E L W N I D P K R A K R I L A N R Q S A A R S K E R K A R Y I Q E L E H K V Q T L Q T
gm004901_Glyma0    F G E I M D A K K A M P P D K L A E L W T I D P K R A K R I L A N R Q S A A R S K E R K A R Y I Q E L E R K V Q T L Q T
 
AT2G40620.1     E A T T L S A Q L S L F Q R D T T G L S S E N T E L K L R L Q V M E Q Q A K L R D A L N E Q L K K E V E R L K F A T G E
gm031558_Glyma1    E A T T L S A Q L T L Y Q R D T T G L S S E N T E L K L R L Q A M E Q Q A Q L R D A L N D A L M K E V E R L K I A T G E
gm004901_Glyma0    E A T T L S A Q L T L Y Q R D T S G L S T E N T E L K L R L Q A M E Q Q A Q L R D A L N E A L K K E V E R L K V A T G E
 
AT2G40620.1     - V S P A D A Y N L G M A H M Q Y Q Q Q - - - - - P Q Q S F F Q H H H Q Q Q T D A Q N L Q Q M T H Q F H L F Q P N N N Q
gm031558_Glyma1    A L N Q S E S F N L G M H Q M P Y A G P N F F S I P P H S G P S G H - - - - - - - Q N M Q - - - - - - - - - L P P F G H
gm004901_Glyma0    G M S H T E S F N L G M H Q M P F S G S N F I P I P P Q S G P S G H - - - - - - - Q N M Q - - - - - - - - - M P P F G H
 
AT2G40620.1     N Q S S R T N P P T A H Q L M H H A T S N A P A Q S H S Y S E A M H E D H L G R L Q G L D I S S C G R G S N F G R S D -
gm031558_Glyma1    S Q S T V - - - P T - H Q L - - Q Q T N - - - - - S H Q M S D I L Q N D Q L G R L Q G L D I S S - - K G T P M V K S E G
gm004901_Glyma0    S P S T M - - - P T - H Q L - - H Q T S - - - - - S H P Y S E I L Q N E Q L G R F Q G L D I S S - - K G S T L V K S E G
 
AT2G40620.1     - - - T V S E S S S T M
gm031558_Glyma1    P S I S A N E S S T T F
gm004901_Glyma0    P S L S A S E S S S T F
 
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