fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt044250 not found in 323aa AT3G10760.1 1st_not 0.490813648 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40970.1     MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQK-
pt044250_POPTR_ MREDDSNWFSRWEEELPSLEELMPLSQTLITPDLALAFDITNPTNTTNTNNHNSSLHQNQ
                ****:.*** ******** ***:*:*******.*****:* .*.:  .::. .:  **: 

AT2G40970.1     ---------LQSSTTPTTPTPTPPPMMMNS-DFGGGDSTDLGSGSIGGEPARTLKRPRLV
pt044250_POPTR_ PLPPPPPPPAAVSPTPTNPLASPQP---NSGDF-ATDSGELGSGAGGDEPARTLKRPRLV
                            *.***.* .:* *   ** ** . ** :****: *.************

AT2G40970.1     WTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQG----
pt044250_POPTR_ WTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYRLYLKRMQGLSSG
                *************.****************.*:******************:****    

AT2G40970.1     ---------GNGNGITGGHVIVSDSATDRLFASSPVPAHFLSP-----DYLMP-------
pt044250_POPTR_ GGGPGNGAVGGGGGLTGG----SDAATDHLFASSPVPAHFLHPGRPNSDHFLPFVPVAAL
                         *.*.*:***    **:***:************ *     *:::*       

AT2G40970.1     ---------------------------PL-----------EHSYMGKHVITQQ-------
pt044250_POPTR_ QQHHHQQQMAAAAAAVGHPQLQGQYHRPMGHFGSPTNGQFEHPFLARQ--TQQPVHRMGA
                                           *:           **.::.::  ***       

AT2G40970.1     ---NQVVRNLRYEDSEYGHGSMKMLKLFPAGN-
pt044250_POPTR_ PVHNAVPGYVEDLESANGNEGRKVLTLFPTGDD
                   * *   :.  :*  *: . *:*.***:*:
BoxShade v3.31 C (beta, 970507) Output
AT2G40970.1     M R E D N P N W F L R W E E E L P S P E E L I P I S Q T L I T P H L A L A F Q I G S P N H H L G S K R T T A I Y H Q K -
pt044250_POPTR_    M R E D D S N W F S R W E E E L P S L E E L M P L S Q T L I T P D L A L A F D I T N P T N T T N T N N H N S S L H Q N Q
 
AT2G40970.1     - - - - - - - - - L Q S S T T P T T P T P T P P P M M M N S - D F G G G D S T D L G S G S I G G E P A R T L K R P R L V
pt044250_POPTR_    P L P P P P P P P A A V S P T P T N P L A S P Q P - - - N S G D F - A T D S G E L G S G A G G D E P A R T L K R P R L V
 
AT2G40970.1     W T P Q L H K R F V D A V G H L G I K N A V P K T I M Q L M S V E G L T R E N V A S H L Q K Y R L Y L R R M Q G - - - -
pt044250_POPTR_    W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M N V D G L T R E N V A S H L Q K Y R L Y L K R M Q G L S S G
 
AT2G40970.1     - - - - - - - - - G N G N G I T G G H V I V S D S A T D R L F A S S P V P A H F L S P - - - - - D Y L M P - - - - - - -
pt044250_POPTR_    G G G P G N G A V G G G G G L T G G - - - - S D A A T D H L F A S S P V P A H F L H P G R P N S D H F L P F V P V A A L
 
AT2G40970.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - P L - - - - - - - - - - - E H S Y M G K H V I T Q Q - - - - - - -
pt044250_POPTR_    Q Q H H H Q Q Q M A A A A A A V G H P Q L Q G Q Y H R P M G H F G S P T N G Q F E H P F L A R Q - - T Q Q P V H R M G A
 
AT2G40970.1     - - - N Q V V R N L R Y E D S E Y G H G S M K M L K L F P A G N -
pt044250_POPTR_    P V H N A V P G Y V E D L E S A N G N E G R K V L T L F P T G D D
 
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