fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005816 not found in 318aa AT3G10760.1 not_not 0.456692913 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40970.1     MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL
pt005816_POPTR_ MREDDSNWFSRWEEELPSLEELMPLSQTLITPDLALAFDITNPSN--TTTTTTTNNHNSS
                ****:.*** ******** ***:*:*******.*****:* .*.:   :. **:  *:. 

AT2G40970.1     QSSTTPTTPTPTPP-------------PMMMNSDFGGGDSTDLGSGSIGGEPARTLKRPR
pt005816_POPTR_ LHQNQPLPPPPPPPAAVSPTPTNPLASPQPNSGDF-AADSSELGSGAAGDEP-RTLKRPR
                  .. * .*.*.**             *   ..** ..**::****: *.** *******

AT2G40970.1     LVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQG--
pt005816_POPTR_ LVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYRLYLKRMQGLS
                ***************.****************.*:******************:****  

AT2G40970.1     --------GNGNGITGGHVIVSDSATDRLFASSPVPAHFLSP-----DYLMP--------
pt005816_POPTR_ SGGGGNGTGGGGGLTGG----TDAATDHLFASSPVPAHFLHPGRPNSDHFLPFVPVAALQ
                        *.*.*:***    :*:***:************ *     *:::*        

AT2G40970.1     ---------------------------------PLEHSYMGKHVITQQ----------NQ
pt005816_POPTR_ NHHHQHQMAAMGHPQLPSQYHRQMGHFGSPTNGQFEHPFLPRQ--TQQPVHRMGAPVPNT
                                                  :**.:: ::  ***          * 

AT2G40970.1     VVRNLRYEDSEYGHGSMKMLKLFPAGN-
pt005816_POPTR_ VPGYVEDLESVNGNGGRKVLTLFPTGDD
                *   :.  :*  *:*. *:*.***:*:
BoxShade v3.31 C (beta, 970507) Output
AT2G40970.1     M R E D N P N W F L R W E E E L P S P E E L I P I S Q T L I T P H L A L A F Q I G S P N H H L G S K R T T A I Y H Q K L
pt005816_POPTR_    M R E D D S N W F S R W E E E L P S L E E L M P L S Q T L I T P D L A L A F D I T N P S N - - T T T T T T T N N H N S S
 
AT2G40970.1     Q S S T T P T T P T P T P P - - - - - - - - - - - - - P M M M N S D F G G G D S T D L G S G S I G G E P A R T L K R P R
pt005816_POPTR_    L H Q N Q P L P P P P P P P A A V S P T P T N P L A S P Q P N S G D F - A A D S S E L G S G A A G D E P - R T L K R P R
 
AT2G40970.1     L V W T P Q L H K R F V D A V G H L G I K N A V P K T I M Q L M S V E G L T R E N V A S H L Q K Y R L Y L R R M Q G - -
pt005816_POPTR_    L V W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M N V D G L T R E N V A S H L Q K Y R L Y L K R M Q G L S
 
AT2G40970.1     - - - - - - - - G N G N G I T G G H V I V S D S A T D R L F A S S P V P A H F L S P - - - - - D Y L M P - - - - - - - -
pt005816_POPTR_    S G G G G N G T G G G G G L T G G - - - - T D A A T D H L F A S S P V P A H F L H P G R P N S D H F L P F V P V A A L Q
 
AT2G40970.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P L E H S Y M G K H V I T Q Q - - - - - - - - - - N Q
pt005816_POPTR_    N H H H Q H Q M A A M G H P Q L P S Q Y H R Q M G H F G S P T N G Q F E H P F L P R Q - - T Q Q P V H R M G A P V P N T
 
AT2G40970.1     V V R N L R Y E D S E Y G H G S M K M L K L F P A G N -
pt005816_POPTR_    V P G Y V E D L E S V N G N G G R K V L T L F P T G D D
 
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