fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt044250 not found in 323aa AT3G10760.1 1st_not 0.490813648 II
Pt005816 not found in 318aa AT3G10760.1 not_not 0.456692913 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G40970.1     MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL
pt005816_POPTR_ MREDDSNWFSRWEEELPSLEELMPLSQTLITPDLALAFDITNPSNT--TTTTTTNNHNSS
pt044250_POPTR_ MREDDSNWFSRWEEELPSLEELMPLSQTLITPDLALAFDITNPTN-----TTNTNNHNSS
                ****:.*** ******** ***:*:*******.*****:* .*.:      *.:  *:. 

AT2G40970.1     QSSTTPTTPTPTPP-------------PMMMNSDFGGGDSTDLGSGSIGGEPARTLKRPR
pt005816_POPTR_ LHQNQPLPPPPPPPAAVSPTPTNPLASPQPNSGDF-AADSSELGSGAAGDEP-RTLKRPR
pt044250_POPTR_ LHQNQPLPPPPPPPAAVSPTPTNPLASPQPNSGDF-ATDSGELGSGAGGDEPARTLKRPR
                  .. * .*.*.**             *   ..** . ** :****: *.** *******

AT2G40970.1     LVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQG--
pt005816_POPTR_ LVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYRLYLKRMQGLS
pt044250_POPTR_ LVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYRLYLKRMQGLS
                ***************.****************.*:******************:****  

AT2G40970.1     -----------GNGNGITGGHVIVSDSATDRLFASSPVPAHFLSP-----DYLMP-----
pt005816_POPTR_ SGGGGNGT---GGGGGLTGG----TDAATDHLFASSPVPAHFLHPGRPNSDHFLPFVPVA
pt044250_POPTR_ SGGGGPGNGAVGGGGGLTGG----SDAATDHLFASSPVPAHFLHPGRPNSDHFLPFVPVA
                           *.*.*:***    :*:***:************ *     *:::*     

AT2G40970.1     ----------------------------------------PLEHSYMGKHVITQQ-----
pt005816_POPTR_ ALQNHHHQHQM----AAMGHPQLPSQYHRQMGHFGSPTNGQFEHPFLPRQ--TQQPVHRM
pt044250_POPTR_ ALQQHHHQQQMAAAAAAVGHPQLQGQYHRPMGHFGSPTNGQFEHPFLARQ--TQQPVHRM
                                                         :**.:: ::  ***     

AT2G40970.1     -----NQVVRNLRYEDSEYGHGSMKMLKLFPAGN-
pt005816_POPTR_ GAPVPNTVPGYVEDLESVNGNGGRKVLTLFPTGDD
pt044250_POPTR_ GAPVHNAVPGYVEDLESANGNEGRKVLTLFPTGDD
                     * *   :.  :*  *: . *:*.***:*:
BoxShade v3.31 C (beta, 970507) Output
AT2G40970.1     M R E D N P N W F L R W E E E L P S P E E L I P I S Q T L I T P H L A L A F Q I G S P N H H L G S K R T T A I Y H Q K L
pt005816_POPTR_    M R E D D S N W F S R W E E E L P S L E E L M P L S Q T L I T P D L A L A F D I T N P S N T - - T T T T T T N N H N S S
pt044250_POPTR_    M R E D D S N W F S R W E E E L P S L E E L M P L S Q T L I T P D L A L A F D I T N P T N - - - - - T T N T N N H N S S
 
AT2G40970.1     Q S S T T P T T P T P T P P - - - - - - - - - - - - - P M M M N S D F G G G D S T D L G S G S I G G E P A R T L K R P R
pt005816_POPTR_    L H Q N Q P L P P P P P P P A A V S P T P T N P L A S P Q P N S G D F - A A D S S E L G S G A A G D E P - R T L K R P R
pt044250_POPTR_    L H Q N Q P L P P P P P P P A A V S P T P T N P L A S P Q P N S G D F - A T D S G E L G S G A G G D E P A R T L K R P R
 
AT2G40970.1     L V W T P Q L H K R F V D A V G H L G I K N A V P K T I M Q L M S V E G L T R E N V A S H L Q K Y R L Y L R R M Q G - -
pt005816_POPTR_    L V W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M N V D G L T R E N V A S H L Q K Y R L Y L K R M Q G L S
pt044250_POPTR_    L V W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M N V D G L T R E N V A S H L Q K Y R L Y L K R M Q G L S
 
AT2G40970.1     - - - - - - - - - - - G N G N G I T G G H V I V S D S A T D R L F A S S P V P A H F L S P - - - - - D Y L M P - - - - -
pt005816_POPTR_    S G G G G N G T - - - G G G G G L T G G - - - - T D A A T D H L F A S S P V P A H F L H P G R P N S D H F L P F V P V A
pt044250_POPTR_    S G G G G P G N G A V G G G G G L T G G - - - - S D A A T D H L F A S S P V P A H F L H P G R P N S D H F L P F V P V A
 
AT2G40970.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P L E H S Y M G K H V I T Q Q - - - - -
pt005816_POPTR_    A L Q N H H H Q H Q M - - - - A A M G H P Q L P S Q Y H R Q M G H F G S P T N G Q F E H P F L P R Q - - T Q Q P V H R M
pt044250_POPTR_    A L Q Q H H H Q Q Q M A A A A A A V G H P Q L Q G Q Y H R P M G H F G S P T N G Q F E H P F L A R Q - - T Q Q P V H R M
 
AT2G40970.1     - - - - - N Q V V R N L R Y E D S E Y G H G S M K M L K L F P A G N -
pt005816_POPTR_    G A P V P N T V P G Y V E D L E S V N G N G G R K V L T L F P T G D D
pt044250_POPTR_    G A P V H N A V P G Y V E D L E S A N G N E G R K V L T L F P T G D D
 
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