fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051924 not found in 312aa AT3G10760.1 1st_not 0.496062992 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40970.1     MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSP---------NHHLGSKR
gm051924_Glyma1 MREDDSNWFSRWEEELPSPEELMPLSQTLITPDLAMAFDIRNPHTSNTAQNQHHH-----
                ****:.*** ************:*:*******.**:**:* .*         :**     

AT2G40970.1     TTAIYHQKLQSS--TTPTTPTPTPPPMMM------------NSDFGGGDSTDLGSGSIGG
gm051924_Glyma1 ----HHQNQQPPQLQQPSNPSSLPNPQQQQQQQQQQQQQPTSAEF--ADSGELGSGTAGE
                    :**: *..    *:.*:. * *               .::*  .** :****: * 

AT2G40970.1     EPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYR
gm051924_Glyma1 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR
                *************************.******************:***************

AT2G40970.1     LYLRRMQGGNGNGITGGHVIVSDSATDRLFASSPVPAHFLSP------DYLMP--PLEHS
gm051924_Glyma1 LYLKRMQGISAAGPGGASGAVADPATDHLFASSPVPAHFLHPAARPNSDHFLPFVPALHH
                ***:**** .. *  *.   *:*.***:************ *      *:::*  *  * 

AT2G40970.1     YMGKHVITQQNQVVRNLRY-----------------------------------------
gm051924_Glyma1 HQ------QQQQMAAAAQYHRQVGHFGSPPNGHFENPFMSRPNLQRMGGGGGPVHNNHHP
                :       **:*:.   :*                                         

AT2G40970.1     -----EDSEYGH---GSMKMLKLFPAGN-
gm051924_Glyma1 VSGYVEDMESANAASGGRKVLTLFPTGDD
                     ** * .:   *. *:*.***:*:
BoxShade v3.31 C (beta, 970507) Output
AT2G40970.1     M R E D N P N W F L R W E E E L P S P E E L I P I S Q T L I T P H L A L A F Q I G S P - - - - - - - - - N H H L G S K R
gm051924_Glyma1    M R E D D S N W F S R W E E E L P S P E E L M P L S Q T L I T P D L A M A F D I R N P H T S N T A Q N Q H H H - - - - -
 
AT2G40970.1     T T A I Y H Q K L Q S S - - T T P T T P T P T P P P M M M - - - - - - - - - - - - N S D F G G G D S T D L G S G S I G G
gm051924_Glyma1    - - - - H H Q N Q Q P P Q L Q Q P S N P S S L P N P Q Q Q Q Q Q Q Q Q Q Q Q Q P T S A E F - - A D S G E L G S G T A G E
 
AT2G40970.1     E P A R T L K R P R L V W T P Q L H K R F V D A V G H L G I K N A V P K T I M Q L M S V E G L T R E N V A S H L Q K Y R
gm051924_Glyma1    E P A R T L K R P R L V W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R
 
AT2G40970.1     L Y L R R M Q G G N G N G I T G G H V I V S D S A T D R L F A S S P V P A H F L S P - - - - - - D Y L M P - - P L E H S
gm051924_Glyma1    L Y L K R M Q G I S A A G P G G A S G A V A D P A T D H L F A S S P V P A H F L H P A A R P N S D H F L P F V P A L H H
 
AT2G40970.1     Y M G K H V I T Q Q N Q V V R N L R Y - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm051924_Glyma1    H Q - - - - - - Q Q Q Q M A A A A Q Y H R Q V G H F G S P P N G H F E N P F M S R P N L Q R M G G G G G P V H N N H H P
 
AT2G40970.1     - - - - - E D S E Y G H - - - G S M K M L K L F P A G N -
gm051924_Glyma1    V S G Y V E D M E S A N A A S G G R K V L T L F P T G D D
 
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