fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006851 not found in 287aa AT3G10760.1 not_not 0.482939632 III
Gm004219 not found in 260aa AT3G10760.1 not_not 0.443569553 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G40970.1     MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL
gm006851_Glyma0 MREEDSNWFSRWEEEFPSPEELMPLSQTLITPDLAMAFDIRNPHTTNTAQQQHHQHQQQP
gm004219_Glyma0 MREEDSNWFSSWEEELPPPEELMPLSQTLISHNLAIAFDITNP----SQQQQQQQYSQQG
                ***::.***  ****:*.****:*:*****: .**:**:* .*      ::    : *: 

AT2G40970.1     QSSTTPTTPTPTPPPMMM--------NSDFGGGDSTDLGSGSIGGEPARTLKRPRLVWTP
gm006851_Glyma0 QQQQQPSNPSSLPNPLQQQQQQQQPTSAEF--ADSGELGSGTAGEEPARTLKRPRLVWTP
gm004219_Glyma0 QEQEQ-----------QQQFPHQVPDNID---------------EEPARTLKRPRLVWTP
                *..                       . :                ***************

AT2G40970.1     QLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQ-------G
gm006851_Glyma0 QLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISAAGPG
gm004219_Glyma0 QLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAG--G
                **********.******************:******************:***       *

AT2G40970.1     GNGNGITGGHVIVSDSATDRLFASSPVPAHFLSP------DYLMPPLEHSYMGKHVITQQ
gm006851_Glyma0 GPGGGASGA---VADPATDHLFASSPVPAHFLHPAARPNSDHFLPF----VPALHPHQQQ
gm004219_Glyma0 GVGRVAS------ADPTTDRLFASSPVPPHFLQ---RPGSDHFLPLV--SVPAL---QQQ
                * *   :      :*.:**:********.***        *:::*       .     **

AT2G40970.1     NQ----------------------------------VVRNL-----RY--EDSEYG---H
gm006851_Glyma0 QQ---------MAAAAQYHRQVGHFGSPPNGHFENPFI--------GY-VEDMESANAAS
gm004219_Glyma0 QQRHHHQHLAVAASAAAGHRQ---FGLPPNGHFELPILSRMGAPVPGYAAEDVE-----S
                :*                                  .:         *  ** *      

AT2G40970.1     GSMKMLKLFPAGN-
gm006851_Glyma0 GGRKVLTLFPTGDD
gm004219_Glyma0 GGRKVLTLFPAGDE
                *. *:*.***:*:
BoxShade v3.31 C (beta, 970507) Output
AT2G40970.1     M R E D N P N W F L R W E E E L P S P E E L I P I S Q T L I T P H L A L A F Q I G S P N H H L G S K R T T A I Y H Q K L
gm006851_Glyma0    M R E E D S N W F S R W E E E F P S P E E L M P L S Q T L I T P D L A M A F D I R N P H T T N T A Q Q Q H H Q H Q Q Q P
gm004219_Glyma0    M R E E D S N W F S S W E E E L P P P E E L M P L S Q T L I S H N L A I A F D I T N P - - - - S Q Q Q Q Q Q Q Y S Q Q G
 
AT2G40970.1     Q S S T T P T T P T P T P P P M M M - - - - - - - - N S D F G G G D S T D L G S G S I G G E P A R T L K R P R L V W T P
gm006851_Glyma0    Q Q Q Q Q P S N P S S L P N P L Q Q Q Q Q Q Q Q P T S A E F - - A D S G E L G S G T A G E E P A R T L K R P R L V W T P
gm004219_Glyma0    Q E Q E Q - - - - - - - - - - - Q Q Q F P H Q V P D N I D - - - - - - - - - - - - - - - E E P A R T L K R P R L V W T P
 
AT2G40970.1     Q L H K R F V D A V G H L G I K N A V P K T I M Q L M S V E G L T R E N V A S H L Q K Y R L Y L R R M Q - - - - - - - G
gm006851_Glyma0    Q L H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R L Y L K R M Q G I S A A G P G
gm004219_Glyma0    Q L H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R L Y L K R M Q G L S A G - - G
 
AT2G40970.1     G N G N G I T G G H V I V S D S A T D R L F A S S P V P A H F L S P - - - - - - D Y L M P P L E H S Y M G K H V I T Q Q
gm006851_Glyma0    G P G G G A S G A - - - V A D P A T D H L F A S S P V P A H F L H P A A R P N S D H F L P F - - - - V P A L H P H Q Q Q
gm004219_Glyma0    G V G R V A S - - - - - - A D P T T D R L F A S S P V P P H F L Q - - - R P G S D H F L P L V - - S V P A L - - - Q Q Q
 
AT2G40970.1     N Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V V R N L - - - - - R Y - - E D S E Y G - - - H
gm006851_Glyma0    Q Q - - - - - - - - - M A A A A Q Y H R Q V G H F G S P P N G H F E N P F I - - - - - - - - G Y - V E D M E S A N A A S
gm004219_Glyma0    Q Q R H H H Q H L A V A A S A A A G H R Q - - - F G L P P N G H F E L P I L S R M G A P V P G Y A A E D V E - - - - - S
 
AT2G40970.1     G S M K M L K L F P A G N -
gm006851_Glyma0    G G R K V L T L F P T G D D
gm004219_Glyma0    G G R K V L T L F P A G D E
 
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