fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41070.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt007527 not found in 267aa AT3G56850.1 1st_not 0.478260869 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G41070.2     MGSIRGNIEEPISQSLTRQNSLYSLKLHEVQTHLGSSGKPLGSMNLDELLKTV--LPPAE
pt007527_POPTR_ MGSQGGSFEEENPESLMGQGSLCSLTLDEVQNQLGNLGKPLGSMNLDDLLKSVDNVGAWS
                ***  *.:**  .:**  *.** **.*.***.:**. **********:***:*  : . .

AT2G41070.2     EGLVRQGSLTLPRDLSKKTVDEVWRDIQQ----DKNGNGTSTTTTHKQPTLGEITLEDLL
pt007527_POPTR_ APMNRQGSLTLSRDLSKKTVEEVWRDIQQLDKKDDDNPG-------RNAPFGEMTLEDFL
                  : *******.********:********    *.:. *       ::..:**:****:*

AT2G41070.2     LRAGVVTETVVPQENVVNIASNGQWVEYH----HQPQQQQGFMT-----YPVCEMQ--DM
pt007527_POPTR_ VKAGVVTESTPVQQQESN-----QWMQFQLPSVQQPVYQNNMMTVVDAAYPDSQMNISPS
                ::******:.  *::  *     **::::    :**  *:.:**     ** .:*:    

AT2G41070.2     VMMGGLSDTPQAPGRKRVA-GEIVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKV
pt007527_POPTR_ SLMGTLSDT-QTPGRKRVAPGDVVEKTVERKQKRMIKNRESAARSRARRQAYTHELEIKV
                 :** **** *:******* *::*******:*****************:***********

AT2G41070.2     SRLEEENEKLRRLKEVEKILPSEPPPDPKWKLRRTNSASL
pt007527_POPTR_ SHLEEENERLRKQEKAEKVLPCAPPPEPKSQLRRTSSAPL
                *:******:**: ::.**:**. ***:** :****.**.*
BoxShade v3.31 C (beta, 970507) Output
AT2G41070.2     M G S I R G N I E E P I S Q S L T R Q N S L Y S L K L H E V Q T H L G S S G K P L G S M N L D E L L K T V - - L P P A E
pt007527_POPTR_    M G S Q G G S F E E E N P E S L M G Q G S L C S L T L D E V Q N Q L G N L G K P L G S M N L D D L L K S V D N V G A W S
 
AT2G41070.2     E G L V R Q G S L T L P R D L S K K T V D E V W R D I Q Q - - - - D K N G N G T S T T T T H K Q P T L G E I T L E D L L
pt007527_POPTR_    A P M N R Q G S L T L S R D L S K K T V E E V W R D I Q Q L D K K D D D N P G - - - - - - - R N A P F G E M T L E D F L
 
AT2G41070.2     L R A G V V T E T V V P Q E N V V N I A S N G Q W V E Y H - - - - H Q P Q Q Q Q G F M T - - - - - Y P V C E M Q - - D M
pt007527_POPTR_    V K A G V V T E S T P V Q Q Q E S N - - - - - Q W M Q F Q L P S V Q Q P V Y Q N N M M T V V D A A Y P D S Q M N I S P S
 
AT2G41070.2     V M M G G L S D T P Q A P G R K R V A - G E I V E K T V E R R Q K R M I K N R E S A A R S R A R K Q A Y T H E L E I K V
pt007527_POPTR_    S L M G T L S D T - Q T P G R K R V A P G D V V E K T V E R K Q K R M I K N R E S A A R S R A R R Q A Y T H E L E I K V
 
AT2G41070.2     S R L E E E N E K L R R L K E V E K I L P S E P P P D P K W K L R R T N S A S L
pt007527_POPTR_    S H L E E E N E R L R K Q E K A E K V L P C A P P P E P K S Q L R R T S S A P L
 
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