fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41070.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb018840 not found in 324aa AT3G56850.1 1st_not 0.412008281 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G41070.2     --------MGSIRGNIEEPISQSLTRQNSLYSLKLHEVQTHLGSSGKPLGSMNLDELLKT
Sb018840_Sorbi1 MSSQTGGGRGSDAGSVQRGQMQSLARQGSLYNLTLDEVQSHL---GEPLLSMNFDELLKS
                         **  *.::.   ***:**.***.*.*.***:**   *:** ***:*****:

AT2G41070.2     VLPPAEE-------------GLVRQGSLTLPRDLSKKTVDEVWRDIQQDKNGNGTSTTTT
Sb018840_Sorbi1 VFPDGVDPDGAVSGKPDPTSSLQRQGSIMMPLQLSKKTVDEVWKGIQ---GGPETSAAVD
                *:* . :             .* ****: :* :**********:.**   .*  **::. 

AT2G41070.2     -----HKQPTLGEITLEDLLLRAGVVTE-----TVVPQENVVNIASN------------G
Sb018840_Sorbi1 GRQRRERQPTLGEMTLEDFLVKAGVVTEGHMKDSADLQSNVDTVGSSVVVAGASSLNPGA
                     .:******:****:*::******     :.  *.** .:.*.            .

AT2G41070.2     QWVEYH-------HQPQQQQGFMT-----YPVCEMQDMVM-------------MGGLSDT
Sb018840_Sorbi1 QWLQQYQQQALGSQQPSLAGSYMASQLHPQPLSIATGAIMDSIYSDGQITSPSFGALSD-
                **:: :       :**.   .:*:      *:.   . :*             :*.*** 

AT2G41070.2     PQAPGRKRVA-GEIVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENEK
Sb018840_Sorbi1 PQTPGRKRGALGEVVDKVVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENER
                **:***** * **:*:*.**************************:*** **********:

AT2G41070.2     LRRLKEVEKILPSEPPPDPKWKLRRTNSASL
Sb018840_Sorbi1 LKKQQELDEILSSAPPPEPKYQLRRTGSAAF
                *:: :*:::**.* ***:**::****.**::
BoxShade v3.31 C (beta, 970507) Output
AT2G41070.2     - - - - - - - - M G S I R G N I E E P I S Q S L T R Q N S L Y S L K L H E V Q T H L G S S G K P L G S M N L D E L L K T
Sb018840_Sorbi1    M S S Q T G G G R G S D A G S V Q R G Q M Q S L A R Q G S L Y N L T L D E V Q S H L - - - G E P L L S M N F D E L L K S
 
AT2G41070.2     V L P P A E E - - - - - - - - - - - - - G L V R Q G S L T L P R D L S K K T V D E V W R D I Q Q D K N G N G T S T T T T
Sb018840_Sorbi1    V F P D G V D P D G A V S G K P D P T S S L Q R Q G S I M M P L Q L S K K T V D E V W K G I Q - - - G G P E T S A A V D
 
AT2G41070.2     - - - - - H K Q P T L G E I T L E D L L L R A G V V T E - - - - - T V V P Q E N V V N I A S N - - - - - - - - - - - - G
Sb018840_Sorbi1    G R Q R R E R Q P T L G E M T L E D F L V K A G V V T E G H M K D S A D L Q S N V D T V G S S V V V A G A S S L N P G A
 
AT2G41070.2     Q W V E Y H - - - - - - - H Q P Q Q Q Q G F M T - - - - - Y P V C E M Q D M V M - - - - - - - - - - - - - M G G L S D T
Sb018840_Sorbi1    Q W L Q Q Y Q Q Q A L G S Q Q P S L A G S Y M A S Q L H P Q P L S I A T G A I M D S I Y S D G Q I T S P S F G A L S D -
 
AT2G41070.2     P Q A P G R K R V A - G E I V E K T V E R R Q K R M I K N R E S A A R S R A R K Q A Y T H E L E I K V S R L E E E N E K
Sb018840_Sorbi1    P Q T P G R K R G A L G E V V D K V V E R R Q K R M I K N R E S A A R S R A R K Q A Y T N E L E N K V S R L E E E N E R
 
AT2G41070.2     L R R L K E V E K I L P S E P P P D P K W K L R R T N S A S L
Sb018840_Sorbi1    L K K Q Q E L D E I L S S A P P P E P K Y Q L R R T G S A A F
 
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