fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41070.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051885 not found in 304aa AT3G56850.1 1st_not 0.457556935 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G41070.2     MGSIRGNI--EEPISQSLTRQNSLYSLKLHEVQTHLGSSGKPLGSMNLDELLKTVLPPAE
gm051885_Glyma1 MGSQGGTTQDQEPKTGSLTRQGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSVW-TAE
                ***  *.   :** : *****.***.*.*.***.:**. **************:*  .**

AT2G41070.2     EG-----------------LVRQGSLTLPRDLSKKTVDEVWRDIQQDKNGNGTSTTTTHK
gm051885_Glyma1 SGTDAYMQHGGQVASAGSSLNPQGSLTLSGNLSKKTIDEVWRDMQQNK------SVGKER
                .*                 *  ******. :*****:******:**:*      :. ..:

AT2G41070.2     QPTLGEITLEDLLLRAGVVTETVVPQENVV----------NIASNGQWVEY-----HHQP
gm051885_Glyma1 QPTLGEMTLEDFLVKAGVATEP-FPNEDGAMAMSGVDSQHNTSQHAHWMQYQLTSVQQQP
                ******:****:*::***.**. .*:*: .          * :.:.:*::*     ::**

AT2G41070.2     QQQ----QGFMTYPVCEMQDMV------------MMGGLSDTPQAPGRKR-VAGEIVEKT
gm051885_Glyma1 QQQQHQHQNQQNSPIPIVVNTVLDAGYSEALPSSLMGALSDS-QTAGRKRDASGNVVEKI
                ***    *.  . *:  : : *            :**.***: *:.**** .:*::*** 

AT2G41070.2     VERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENEKLRRLKEVEKILPSEPPPD
gm051885_Glyma1 VERRQKRMIKNRESAARSRARKQAYTQELEIKVSQLEEENERLRRQNEIERALPSAPPPD
                **************************:*******:******:*** :*:*: *** ****

AT2G41070.2     PKWKLRRTNSASL
gm051885_Glyma1 PKHQLRRTSSAPL
                ** :****.**.*
BoxShade v3.31 C (beta, 970507) Output
AT2G41070.2     M G S I R G N I - - E E P I S Q S L T R Q N S L Y S L K L H E V Q T H L G S S G K P L G S M N L D E L L K T V L P P A E
gm051885_Glyma1    M G S Q G G T T Q D Q E P K T G S L T R Q G S L Y N L T L D E V Q N Q L G N L G K P L G S M N L D E L L K S V W - T A E
 
AT2G41070.2     E G - - - - - - - - - - - - - - - - - L V R Q G S L T L P R D L S K K T V D E V W R D I Q Q D K N G N G T S T T T T H K
gm051885_Glyma1    S G T D A Y M Q H G G Q V A S A G S S L N P Q G S L T L S G N L S K K T I D E V W R D M Q Q N K - - - - - - S V G K E R
 
AT2G41070.2     Q P T L G E I T L E D L L L R A G V V T E T V V P Q E N V V - - - - - - - - - - N I A S N G Q W V E Y - - - - - H H Q P
gm051885_Glyma1    Q P T L G E M T L E D F L V K A G V A T E P - F P N E D G A M A M S G V D S Q H N T S Q H A H W M Q Y Q L T S V Q Q Q P
 
AT2G41070.2     Q Q Q - - - - Q G F M T Y P V C E M Q D M V - - - - - - - - - - - - M M G G L S D T P Q A P G R K R - V A G E I V E K T
gm051885_Glyma1    Q Q Q Q H Q H Q N Q Q N S P I P I V V N T V L D A G Y S E A L P S S L M G A L S D S - Q T A G R K R D A S G N V V E K I
 
AT2G41070.2     V E R R Q K R M I K N R E S A A R S R A R K Q A Y T H E L E I K V S R L E E E N E K L R R L K E V E K I L P S E P P P D
gm051885_Glyma1    V E R R Q K R M I K N R E S A A R S R A R K Q A Y T Q E L E I K V S Q L E E E N E R L R R Q N E I E R A L P S A P P P D
 
AT2G41070.2     P K W K L R R T N S A S L
gm051885_Glyma1    P K H Q L R R T S S A P L
 
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