fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006871 not found in 242aa AT2G41130.1 not_1st 0.529691211 II
Gm004229 SRTRRRLDLSLELLER in 10/184 AT2G41130.1 not_1st 0.498812351 II
Pt005185 not found in 240aa AT2G41130.1 not_1st 0.560570071 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G41130.1     MQPE--TSDQML---YSFLAGNE--VGGGGYCVSGDYMTTMQSLCGSSSSTS---SYYPL
gm006871_Glyma0 ------MDNSHL---LQFLPNTTTSTNNTPF----FHHAPPHTHSTFSTNSSNNTSSYPF
gm004229_Glyma0 MNFRS-RTRRRLDLSLELLERST--RDFSEFCRN-WIDSPLWSLSVATTRTLRV------
pt005185_POPTR_ MQPENCQENSQL---YRFLTENGM-INVGPY----GFPAAMQTLCTSSSTSYHN-SNYHF
                           *     :*  .    .   :       :.  : .  :: :         

AT2G41130.1     AISGIGE-TMA-QDRALAALRNHKEAERR-------RRERINSHLNKLRNVLSCNSKTDK
gm006871_Glyma0 HLSQITE-TPSHHDRALAAMKNHKEAEKR-------RRERINSHLDQLRTLLPCNSKTDK
gm004229_Glyma0 --------LP--PSVAISALSVFRRRDLRISMSSGMRSERSSQHREALNMRRPSLSSQPP
pt005185_POPTR_ ERSVITDMTP--EDRALAALKNHKEAEKR-------RRERINSHLDKLRGLLPCNSKTDK
                             . *::*:  .:. : *       * ** ..* : *.   .. *.   

AT2G41130.1     ATLLAKVVQRVRELKQQTLETSDSDQTLLPSETDEISVLHF--GDYSN---DGHIIFKAS
gm006871_Glyma0 ASLLAKVVQRVKELKQQTSEITELET--VPSETDEITVLATTGGDYASGGDDGRLIFKAS
gm004229_Glyma0 WSSLSPLVD-----KTETSSVSDGNA----SESDS---------------ED--------
pt005185_POPTR_ ASLLAKVVQRVRELKQQTSELPGLES--FPSETDEVTVLS---GEYSS---DGQLIFKAS
                 : *: :*:     * :* . .  :     **:*.                *        

AT2G41130.1     LCCEDRSDLLPDLM--EILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQ
gm006871_Glyma0 LCCEDRSDLIPDLI--EILNSLHLKTLKAEMATLGGRTRNVLIVAADKE-HSIESIHFLQ
gm004229_Glyma0 ICCFNSLTRWTTLARREALSVLELQGRRVRSLSRWELILSLLLFSA--------SLWFLK
pt005185_POPTR_ LCCEDRSDLMPDLI--EILKSLHLKTLKAEMVTLGGRIRNVLIIAADKD-HSVESVHFLQ
                :** :     . *   * *. *.::  :..  :      .:*:.:*        *: **:

AT2G41130.1     NALKSLLERSSKSLMERSSGGGGGERSKRRRALDHIIMV-
gm006871_Glyma0 NSLKSLLDRSSS-----------GDRSKRRRGLDRRLMS-
gm004229_Glyma0 -----------------------AARA-------------
pt005185_POPTR_ NALKSLLERSNS-----------SERSKRRRVLDRKLVIQ
                                       . *:
BoxShade v3.31 C (beta, 970507) Output
AT2G41130.1     M Q P E - - T S D Q M L - - - Y S F L A G N E - - V G G G G Y C V S G D Y M T T M Q S L C G S S S S T S - - - S Y Y P L
gm006871_Glyma0    - - - - - - M D N S H L - - - L Q F L P N T T T S T N N T P F - - - - F H H A P P H T H S T F S T N S S N N T S S Y P F
gm004229_Glyma0    M N F R S - R T R R R L D L S L E L L E R S T - - R D F S E F C R N - W I D S P L W S L S V A T T R T L R V - - - - - -
pt005185_POPTR_    M Q P E N C Q E N S Q L - - - Y R F L T E N G M - I N V G P Y - - - - G F P A A M Q T L C T S S S T S Y H N - S N Y H F
 
AT2G41130.1     A I S G I G E - T M A - Q D R A L A A L R N H K E A E R R - - - - - - - R R E R I N S H L N K L R N V L S C N S K T D K
gm006871_Glyma0    H L S Q I T E - T P S H H D R A L A A M K N H K E A E K R - - - - - - - R R E R I N S H L D Q L R T L L P C N S K T D K
gm004229_Glyma0    - - - - - - - - L P - - P S V A I S A L S V F R R R D L R I S M S S G M R S E R S S Q H R E A L N M R R P S L S S Q P P
pt005185_POPTR_    E R S V I T D M T P - - E D R A L A A L K N H K E A E K R - - - - - - - R R E R I N S H L D K L R G L L P C N S K T D K
 
AT2G41130.1     A T L L A K V V Q R V R E L K Q Q T L E T S D S D Q T L L P S E T D E I S V L H F - - G D Y S N - - - D G H I I F K A S
gm006871_Glyma0    A S L L A K V V Q R V K E L K Q Q T S E I T E L E T - - V P S E T D E I T V L A T T G G D Y A S G G D D G R L I F K A S
gm004229_Glyma0    W S S L S P L V D - - - - - K T E T S S V S D G N A - - - - S E S D S - - - - - - - - - - - - - - - E D - - - - - - - -
pt005185_POPTR_    A S L L A K V V Q R V R E L K Q Q T S E L P G L E S - - F P S E T D E V T V L S - - - G E Y S S - - - D G Q L I F K A S
 
AT2G41130.1     L C C E D R S D L L P D L M - - E I L K S L N M K T L R A E M V T I G G R T R S V L V V A A D K E M H G V E S V H F L Q
gm006871_Glyma0    L C C E D R S D L I P D L I - - E I L N S L H L K T L K A E M A T L G G R T R N V L I V A A D K E - H S I E S I H F L Q
gm004229_Glyma0    I C C F N S L T R W T T L A R R E A L S V L E L Q G R R V R S L S R W E L I L S L L L F S A - - - - - - - - S L W F L K
pt005185_POPTR_    L C C E D R S D L M P D L I - - E I L K S L H L K T L K A E M V T L G G R I R N V L I I A A D K D - H S V E S V H F L Q
 
AT2G41130.1     N A L K S L L E R S S K S L M E R S S G G G G G E R S K R R R A L D H I I M V -
gm006871_Glyma0    N S L K S L L D R S S S - - - - - - - - - - - G D R S K R R R G L D R R L M S -
gm004229_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - A A R A - - - - - - - - - - - - -
pt005185_POPTR_    N A L K S L L E R S N S - - - - - - - - - - - S E R S K R R R V L D R K L V I Q
 
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