fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051940 not found in 246aa AT2G41130.1 1st_1st 0.534441805 Ia
Pt044522 not found in 241aa AT2G41130.1 1st_1st 0.565320665 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G41130.1     MQPE--TSDQMLYSFLAGN-----EVGGGGYCVSGDYMTTMQSLCGSSSST--SSYYPLA
pt044522_POPTR_ MQPENCSENSQLYRFLAEN----GMINVGAYGFPG---AAMQTLCTSSSTSYHNNNYQFE
gm051940_Glyma1 ------MDNSHLLQFLPNTTTTTTTTNTPFFHAAPHTHTMHHPLSTNSSNN--TNYYPFH
                       .:. *  **. .       .   :  .    :  :.*. .**..  .. * : 

AT2G41130.1     ISGIGETMA-QDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQ
pt044522_POPTR_ SSVITDMTP-QDRALAALKNHKEAEKRRRERINSHLDKLRGLLLCNSKTDKASLLAKVVQ
gm051940_Glyma1 LSQITETPSHHDRALAAMKNHKEAEKRRRERINSHLDHLRTLLPCNSKTDKASLLAKVVQ
                 * * :  . :******::******:**********::** :* ********:*******

AT2G41130.1     RVRELKQQTLETSDSDQTLLPSETDEISVLHF--GDYSN---DGHIIFKASLCCEDRSDL
pt044522_POPTR_ RVRELKQQTSELSGLET--FPSETDEVTVLS---GEYSS---DGQLIFKASLCCEDRLDL
gm051940_Glyma1 RVKELKQQTSEITELET--VPSETDEITVLSTTGGDYASGGGDGRLIFKASLCCEDRSDL
                **:****** * :  :   .******::**    *:*:.   **::*********** **

AT2G41130.1     LPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERSS
pt044522_POPTR_ MPELNEILKSLHLKTLKAEMVTLGGRIRNVLIIAADKD-HSVESVHFLQNALKSLLERSN
gm051940_Glyma1 IPDLIEILNSLHLKTLKAEMATLGGRTRNVLVVAADKE-HSIESIHFLQNSLRSILDRSS
                :*:* ***:**::***:***.*:*** *.**::****: *.:**:*****:*:*:*:**.

AT2G41130.1     KSLMERSSGGGGGERSKRRRALDHIIMV-
pt044522_POPTR_ SS-----------EKSKRRRILDRKLVIQ
gm051940_Glyma1 SG-----------DRSKRRRGLDRRLMS-
                ..           ::***** **: ::
BoxShade v3.31 C (beta, 970507) Output
AT2G41130.1     M Q P E - - T S D Q M L Y S F L A G N - - - - - E V G G G G Y C V S G D Y M T T M Q S L C G S S S S T - - S S Y Y P L A
pt044522_POPTR_    M Q P E N C S E N S Q L Y R F L A E N - - - - G M I N V G A Y G F P G - - - A A M Q T L C T S S S T S Y H N N N Y Q F E
gm051940_Glyma1    - - - - - - M D N S H L L Q F L P N T T T T T T T T N T P F F H A A P H T H T M H H P L S T N S S N N - - T N Y Y P F H
 
AT2G41130.1     I S G I G E T M A - Q D R A L A A L R N H K E A E R R R R E R I N S H L N K L R N V L S C N S K T D K A T L L A K V V Q
pt044522_POPTR_    S S V I T D M T P - Q D R A L A A L K N H K E A E K R R R E R I N S H L D K L R G L L L C N S K T D K A S L L A K V V Q
gm051940_Glyma1    L S Q I T E T P S H H D R A L A A M K N H K E A E K R R R E R I N S H L D H L R T L L P C N S K T D K A S L L A K V V Q
 
AT2G41130.1     R V R E L K Q Q T L E T S D S D Q T L L P S E T D E I S V L H F - - G D Y S N - - - D G H I I F K A S L C C E D R S D L
pt044522_POPTR_    R V R E L K Q Q T S E L S G L E T - - F P S E T D E V T V L S - - - G E Y S S - - - D G Q L I F K A S L C C E D R L D L
gm051940_Glyma1    R V K E L K Q Q T S E I T E L E T - - V P S E T D E I T V L S T T G G D Y A S G G G D G R L I F K A S L C C E D R S D L
 
AT2G41130.1     L P D L M E I L K S L N M K T L R A E M V T I G G R T R S V L V V A A D K E M H G V E S V H F L Q N A L K S L L E R S S
pt044522_POPTR_    M P E L N E I L K S L H L K T L K A E M V T L G G R I R N V L I I A A D K D - H S V E S V H F L Q N A L K S L L E R S N
gm051940_Glyma1    I P D L I E I L N S L H L K T L K A E M A T L G G R T R N V L V V A A D K E - H S I E S I H F L Q N S L R S I L D R S S
 
AT2G41130.1     K S L M E R S S G G G G G E R S K R R R A L D H I I M V -
pt044522_POPTR_    S S - - - - - - - - - - - E K S K R R R I L D R K L V I Q
gm051940_Glyma1    S G - - - - - - - - - - - D R S K R R R G L D R R L M S -
 
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