fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005185 not found in 240aa AT2G41130.1 not_1st 0.560570071 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G41130.1     MQPET--SDQMLYSFLAGN---EVGGGGYCVSGDYMTTMQSLCGSSSST--SSYYPLAIS
pt005185_POPTR_ MQPENCQENSQLYRFLTENGMINVGPYGFPAA------MQTLCTSSSTSYHNSNYHFERS
                ****.  .:. ** **: *   :**  *: .:      **:** ***::  .* * :  *

AT2G41130.1     GIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVR
pt005185_POPTR_ VITDMTPEDRALAALKNHKEAEKRRRERINSHLDKLRGLLPCNSKTDKASLLAKVVQRVR
                 * :  .:*******:******:**********:***.:*.********:**********

AT2G41130.1     ELKQQTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEIL
pt005185_POPTR_ ELKQQTSELPGLES--FPSETDEVTVLS-GEYSSDGQLIFKASLCCEDRSDLMPDLIEIL
                ****** * .. :.  :******::**  *:**.**::**************:***:***

AT2G41130.1     KSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERSSKSLMERSS
pt005185_POPTR_ KSLHLKTLKAEMVTLGGRIRNVLIIAADKD-HSVESVHFLQNALKSLLERSNSS------
                ***::***:*****:*** *.**::****: *.******************..*      

AT2G41130.1     GGGGGERSKRRRALDHIIMV-
pt005185_POPTR_ -----ERSKRRRVLDRKLVIQ
                     *******.**: :::
BoxShade v3.31 C (beta, 970507) Output
AT2G41130.1     M Q P E T - - S D Q M L Y S F L A G N - - - E V G G G G Y C V S G D Y M T T M Q S L C G S S S S T - - S S Y Y P L A I S
pt005185_POPTR_    M Q P E N C Q E N S Q L Y R F L T E N G M I N V G P Y G F P A A - - - - - - M Q T L C T S S S T S Y H N S N Y H F E R S
 
AT2G41130.1     G I G E T M A Q D R A L A A L R N H K E A E R R R R E R I N S H L N K L R N V L S C N S K T D K A T L L A K V V Q R V R
pt005185_POPTR_    V I T D M T P E D R A L A A L K N H K E A E K R R R E R I N S H L D K L R G L L P C N S K T D K A S L L A K V V Q R V R
 
AT2G41130.1     E L K Q Q T L E T S D S D Q T L L P S E T D E I S V L H F G D Y S N D G H I I F K A S L C C E D R S D L L P D L M E I L
pt005185_POPTR_    E L K Q Q T S E L P G L E S - - F P S E T D E V T V L S - G E Y S S D G Q L I F K A S L C C E D R S D L M P D L I E I L
 
AT2G41130.1     K S L N M K T L R A E M V T I G G R T R S V L V V A A D K E M H G V E S V H F L Q N A L K S L L E R S S K S L M E R S S
pt005185_POPTR_    K S L H L K T L K A E M V T L G G R I R N V L I I A A D K D - H S V E S V H F L Q N A L K S L L E R S N S S - - - - - -
 
AT2G41130.1     G G G G G E R S K R R R A L D H I I M V -
pt005185_POPTR_    - - - - - E R S K R R R V L D R K L V I Q
 
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