fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt044522 not found in 241aa AT2G41130.1 1st_1st 0.565320665 Ia
Pt005185 not found in 240aa AT2G41130.1 not_1st 0.560570071 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G41130.1     MQPE--TSDQMLYSFLAGN---EVGGGGYCVSGDYMTTMQSLCGSSSST--SSYYPLAIS
pt044522_POPTR_ MQPENCSENSQLYRFLAENGMINVGAYGFP-----GAAMQTLCTSSSTSYHNNNYQFESS
pt005185_POPTR_ MQPENCQENSQLYRFLTENGMINVGPYGFP------AAMQTLCTSSSTSYHNSNYHFERS
                ****   .:. ** **: *   :**  *:       ::**:** ***::  .. * :  *

AT2G41130.1     GIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVR
pt044522_POPTR_ VITDMTPQDRALAALKNHKEAEKRRRERINSHLDKLRGLLLCNSKTDKASLLAKVVQRVR
pt005185_POPTR_ VITDMTPEDRALAALKNHKEAEKRRRERINSHLDKLRGLLPCNSKTDKASLLAKVVQRVR
                 * :  .:*******:******:**********:***.:* ********:**********

AT2G41130.1     ELKQQTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEIL
pt044522_POPTR_ ELKQQTSELSGLET--FPSETDEVTVLS-GEYSSDGQLIFKASLCCEDRLDLMPELNEIL
pt005185_POPTR_ ELKQQTSELPGLES--FPSETDEVTVLS-GEYSSDGQLIFKASLCCEDRSDLMPDLIEIL
                ****** * .. :   :******::**  *:**.**::*********** **:*:* ***

AT2G41130.1     KSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERSSKSLMERSS
pt044522_POPTR_ KSLHLKTLKAEMVTLGGRIRNVLIIAADKD-HSVESVHFLQNALKSLLERSNSS------
pt005185_POPTR_ KSLHLKTLKAEMVTLGGRIRNVLIIAADKD-HSVESVHFLQNALKSLLERSNSS------
                ***::***:*****:*** *.**::****: *.******************..*      

AT2G41130.1     GGGGGERSKRRRALDHIIMV-
pt044522_POPTR_ -----EKSKRRRILDRKLVIQ
pt005185_POPTR_ -----ERSKRRRVLDRKLVIQ
                     *:***** **: :::
BoxShade v3.31 C (beta, 970507) Output
AT2G41130.1     M Q P E - - T S D Q M L Y S F L A G N - - - E V G G G G Y C V S G D Y M T T M Q S L C G S S S S T - - S S Y Y P L A I S
pt044522_POPTR_    M Q P E N C S E N S Q L Y R F L A E N G M I N V G A Y G F P - - - - - G A A M Q T L C T S S S T S Y H N N N Y Q F E S S
pt005185_POPTR_    M Q P E N C Q E N S Q L Y R F L T E N G M I N V G P Y G F P - - - - - - A A M Q T L C T S S S T S Y H N S N Y H F E R S
 
AT2G41130.1     G I G E T M A Q D R A L A A L R N H K E A E R R R R E R I N S H L N K L R N V L S C N S K T D K A T L L A K V V Q R V R
pt044522_POPTR_    V I T D M T P Q D R A L A A L K N H K E A E K R R R E R I N S H L D K L R G L L L C N S K T D K A S L L A K V V Q R V R
pt005185_POPTR_    V I T D M T P E D R A L A A L K N H K E A E K R R R E R I N S H L D K L R G L L P C N S K T D K A S L L A K V V Q R V R
 
AT2G41130.1     E L K Q Q T L E T S D S D Q T L L P S E T D E I S V L H F G D Y S N D G H I I F K A S L C C E D R S D L L P D L M E I L
pt044522_POPTR_    E L K Q Q T S E L S G L E T - - F P S E T D E V T V L S - G E Y S S D G Q L I F K A S L C C E D R L D L M P E L N E I L
pt005185_POPTR_    E L K Q Q T S E L P G L E S - - F P S E T D E V T V L S - G E Y S S D G Q L I F K A S L C C E D R S D L M P D L I E I L
 
AT2G41130.1     K S L N M K T L R A E M V T I G G R T R S V L V V A A D K E M H G V E S V H F L Q N A L K S L L E R S S K S L M E R S S
pt044522_POPTR_    K S L H L K T L K A E M V T L G G R I R N V L I I A A D K D - H S V E S V H F L Q N A L K S L L E R S N S S - - - - - -
pt005185_POPTR_    K S L H L K T L K A E M V T L G G R I R N V L I I A A D K D - H S V E S V H F L Q N A L K S L L E R S N S S - - - - - -
 
AT2G41130.1     G G G G G E R S K R R R A L D H I I M V -
pt044522_POPTR_    - - - - - E K S K R R R I L D R K L V I Q
pt005185_POPTR_    - - - - - E R S K R R R V L D R K L V I Q
 
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