fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051940 not found in 246aa AT2G41130.1 1st_1st 0.534441805 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G41130.1     MQPETSDQMLYSFLAGNEVGGGGYCVSGDYMTTM-QSLCGSSSSTSSYYPLAISGIGETM
gm051940_Glyma1 MDNSHLLQFLPNTTTTTTTTNTPFFHAAPHTHTMHHPLSTNSSNNTNYYPFHLSQITETP
                *: .   *:* .  : . . .  :  :. :  ** :.*. .**..:.***: :* * ** 

AT2G41130.1     A-QDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQ
gm051940_Glyma1 SHHDRALAAMKNHKEAEKRRRERINSHLDHLRTLLPCNSKTDKASLLAKVVQRVKELKQQ
                : :******::******:**********::**.:*.********:*********:*****

AT2G41130.1     TLETSDSDQTLLPSETDEISVLHF--GDYSN---DGHIIFKASLCCEDRSDLLPDLMEIL
gm051940_Glyma1 TSEITELET--VPSETDEITVLSTTGGDYASGGGDGRLIFKASLCCEDRSDLIPDLIEIL
                * * :: :   :*******:**    ***:.   **::**************:***:***

AT2G41130.1     KSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERSSKSLMERSS
gm051940_Glyma1 NSLHLKTLKAEMATLGGRTRNVLVVAADKE-HSIESIHFLQNSLRSILDRSSS-------
                :**::***:***.*:*****.********* *.:**:*****:*:*:*:***.       

AT2G41130.1     GGGGGERSKRRRALDHIIMV
gm051940_Glyma1 ----GDRSKRRRGLDRRLMS
                    *:******.**: :*
BoxShade v3.31 C (beta, 970507) Output
AT2G41130.1     M Q P E T S D Q M L Y S F L A G N E V G G G G Y C V S G D Y M T T M - Q S L C G S S S S T S S Y Y P L A I S G I G E T M
gm051940_Glyma1    M D N S H L L Q F L P N T T T T T T T T N T P F F H A A P H T H T M H H P L S T N S S N N T N Y Y P F H L S Q I T E T P
 
AT2G41130.1     A - Q D R A L A A L R N H K E A E R R R R E R I N S H L N K L R N V L S C N S K T D K A T L L A K V V Q R V R E L K Q Q
gm051940_Glyma1    S H H D R A L A A M K N H K E A E K R R R E R I N S H L D H L R T L L P C N S K T D K A S L L A K V V Q R V K E L K Q Q
 
AT2G41130.1     T L E T S D S D Q T L L P S E T D E I S V L H F - - G D Y S N - - - D G H I I F K A S L C C E D R S D L L P D L M E I L
gm051940_Glyma1    T S E I T E L E T - - V P S E T D E I T V L S T T G G D Y A S G G G D G R L I F K A S L C C E D R S D L I P D L I E I L
 
AT2G41130.1     K S L N M K T L R A E M V T I G G R T R S V L V V A A D K E M H G V E S V H F L Q N A L K S L L E R S S K S L M E R S S
gm051940_Glyma1    N S L H L K T L K A E M A T L G G R T R N V L V V A A D K E - H S I E S I H F L Q N S L R S I L D R S S S - - - - - - -
 
AT2G41130.1     G G G G G E R S K R R R A L D H I I M V
gm051940_Glyma1    - - - - G D R S K R R R G L D R R L M S
 
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