fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41690.1 EDEGLKLFGVKLE at 236/244 in AT2G41690.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006953 not found in 231aa AT2G41690.1 not_1st 0.439746300 II
Gm052032 not found in 233aa AT2G41690.1 not_1st 0.435517970 II
Pt006984 EDERPKLFGVRLEVE in 195/226 AT2G41690.1 not_1st 0.452431289 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G41690.1     ---MEDAG--EHLRCNDNVNDEERLPLEFMIGNSTSTAELQPPPPFLVKTYKVVEDPTTD
pt006984_POPTR_ --MADDKGLLEYVR------------------KST-------PPPFLLKTYMLVEDLATD
gm052032_Glyma1 MEGTSNKGLLECGR------------------KCT-------PPPFLLKTYMLVEDPATD
gm006953_Glyma0 MEGTSEKGLWECGR------------------KCT-------PPPFLLKTYMLVDDPATD
                    .: *  *  *                  :.*       *****:*** :*:* :**

AT2G41690.1     GVISWNEYGTGFVVWQPAEFARDLLPTLFKHCNFSSFVRQLNTY--GFRKVTTIRWEFSN
pt006984_POPTR_ DVISWNGEGTGFVVWQPAEFSRDLLPTLFKHSNFSSFVRQLNTY--GFRKVATSRWEFCN
gm052032_Glyma1 DVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNTYVRGFRKVATSRWEFFN
gm006953_Glyma0 DVVSWNSEGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTY--GFRKIATSRWEFFN
                .*:***  **.******.**:**********.************  ****::* **** *

AT2G41690.1     EMFRKGQRELMSNIRRRKSQHWSHNKSNHQVVPTTTMVNQEGHQRIGIDHHHEDQQSSAT
pt006984_POPTR_ DMFRKGERELLRQIRRRKA--WTNKQ--QPIAPLIQVAPQE---------FEEDQRSSST
gm052032_Glyma1 DKFKKGERELLHEIRRRKA--WSSKQ--QPNAP-NQGTPQD---------SDEDQRSSST
gm006953_Glyma0 DRFKKGERELLHEIRRRKA--WTSKQ--QPKAP-NQATLQD---------SDEDQRSSSI
                : *:**:***: :*****:  *: ::  :  .*    . *:          .***:**: 

AT2G41690.1     SSSFVYTALLDENKCLKNENELLSCELGKTKKKCKQLMELVERYRGEDEDATDESDDEED
pt006984_POPTR_ LSSSEYTSLVDENKRLKKENGVLSTELTSMKRKCKELLDLVAK-------NAHLEKEEED
gm052032_Glyma1 SSSFGYTTLVDENKRLKKENGVLNSELTSMKRKCKELLDLVATY------SSHAKEEKKD
gm006953_Glyma0 SSSSGYTTLVDENKRLKKENGVLNSELTSMKRKCKELLDLVAKY------SSHAKEEKED
                 **  **:*:**** **:** :*. ** . *:***:*::**          :. ..:::*

AT2G41690.1     EGLKLFGVKLE---------------------------
pt006984_POPTR_ ERPKLFGVRLEVEGEREKKRKRAEIRESATILLSQ---
gm052032_Glyma1 ERPMLFGVRLEVQGGREMKRNRAEMSESTSIMLSQSCK
gm006953_Glyma0 ERPMLFGVRLDVQGEREMKRHRAEMSESASIMLSQSCK
                *   ****:*:
BoxShade v3.31 C (beta, 970507) Output
AT2G41690.1     - - - M E D A G - - E H L R C N D N V N D E E R L P L E F M I G N S T S T A E L Q P P P P F L V K T Y K V V E D P T T D
pt006984_POPTR_    - - M A D D K G L L E Y V R - - - - - - - - - - - - - - - - - - K S T - - - - - - - P P P F L L K T Y M L V E D L A T D
gm052032_Glyma1    M E G T S N K G L L E C G R - - - - - - - - - - - - - - - - - - K C T - - - - - - - P P P F L L K T Y M L V E D P A T D
gm006953_Glyma0    M E G T S E K G L W E C G R - - - - - - - - - - - - - - - - - - K C T - - - - - - - P P P F L L K T Y M L V D D P A T D
 
AT2G41690.1     G V I S W N E Y G T G F V V W Q P A E F A R D L L P T L F K H C N F S S F V R Q L N T Y - - G F R K V T T I R W E F S N
pt006984_POPTR_    D V I S W N G E G T G F V V W Q P A E F S R D L L P T L F K H S N F S S F V R Q L N T Y - - G F R K V A T S R W E F C N
gm052032_Glyma1    D V I S W N A K G T A F V V W Q P P E F A R D L L P T L F K H S N F S S F V R Q L N T Y V R G F R K V A T S R W E F F N
gm006953_Glyma0    D V V S W N S E G T A F V V W Q P A E F A R D L L P T L F K H S N F S S F V R Q L N T Y - - G F R K I A T S R W E F F N
 
AT2G41690.1     E M F R K G Q R E L M S N I R R R K S Q H W S H N K S N H Q V V P T T T M V N Q E G H Q R I G I D H H H E D Q Q S S A T
pt006984_POPTR_    D M F R K G E R E L L R Q I R R R K A - - W T N K Q - - Q P I A P L I Q V A P Q E - - - - - - - - - F E E D Q R S S S T
gm052032_Glyma1    D K F K K G E R E L L H E I R R R K A - - W S S K Q - - Q P N A P - N Q G T P Q D - - - - - - - - - S D E D Q R S S S T
gm006953_Glyma0    D R F K K G E R E L L H E I R R R K A - - W T S K Q - - Q P K A P - N Q A T L Q D - - - - - - - - - S D E D Q R S S S I
 
AT2G41690.1     S S S F V Y T A L L D E N K C L K N E N E L L S C E L G K T K K K C K Q L M E L V E R Y R G E D E D A T D E S D D E E D
pt006984_POPTR_    L S S S E Y T S L V D E N K R L K K E N G V L S T E L T S M K R K C K E L L D L V A K - - - - - - - N A H L E K E E E D
gm052032_Glyma1    S S S F G Y T T L V D E N K R L K K E N G V L N S E L T S M K R K C K E L L D L V A T Y - - - - - - S S H A K E E K K D
gm006953_Glyma0    S S S S G Y T T L V D E N K R L K K E N G V L N S E L T S M K R K C K E L L D L V A K Y - - - - - - S S H A K E E K E D
 
AT2G41690.1     E G L K L F G V K L E - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt006984_POPTR_    E R P K L F G V R L E V E G E R E K K R K R A E I R E S A T I L L S Q - - -
gm052032_Glyma1    E R P M L F G V R L E V Q G G R E M K R N R A E M S E S T S I M L S Q S C K
gm006953_Glyma0    E R P M L F G V R L D V Q G E R E M K R H R A E M S E S A S I M L S Q S C K
 
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