fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41690.1 EDEGLKLFGVKLE at 236/244 in AT2G41690.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt044842 EDERPKLFGVRLEAE in 194/228 AT2G41690.1 1st_1st 0.475687103 Ia
Pt006984 EDERPKLFGVRLEVE in 195/226 AT2G41690.1 not_1st 0.452431289 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G41690.1     -MEDAG--EHLRCNDNVNDEERLPLEFMIGNSTSTAELQPPPPFLVKTYKVVEDPTTDGV
pt006984_POPTR_ MADDKGLLEYVR------------------KST-------PPPFLLKTYMLVEDLATDDV
pt044842_POPTR_ MANDKGLLEYVR------------------KST-------PPPFLLKTYMLVEDPATDEV
                  :* *  *::*                  :**       *****:*** :*** :** *

AT2G41690.1     ISWNEYGTGFVVWQPAEFARDLLPTLFKHCNFSSFVRQLNTYGFRKVTTIRWEFSNEMFR
pt006984_POPTR_ ISWNGEGTGFVVWQPAEFSRDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNDMFR
pt044842_POPTR_ ISWNEEGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNDMFR
                ****  ************:**********.*****************:* ****.*:***

AT2G41690.1     KGQRELMSNIRRRKSQHWSHNKSNHQVVPTTTMVNQEGHQRIGIDHHHEDQQSSATSSSF
pt006984_POPTR_ KGERELLRQIRRRKA--WTNKQ--QPIAPLIQVAPQE---------FEEDQRSSSTLSSS
pt044842_POPTR_ KGERELLCQIRRRKA--WSSKQ--QPIAP-IQVTTQE---------FEEDQRSSSTSSSS
                **:***: :*****:  *: ::  : :.*   :. **         ..***:**:* ** 

AT2G41690.1     VYTALLDENKCLKNENELLSCELGKTKKKCKQLMELVERYRGEDEDATDESDDEEDEGLK
pt006984_POPTR_ EYTSLVDENKRLKKENGVLSTELTSMKRKCKELLDLVAKNAHLEK-------EEEDERPK
pt044842_POPTR_ EYTTLVDENKRLKKENGVLSTELTSMNRKCKELLDLVAKYAHLEK-------EEEDERPK
                 **:*:**** **:** :** ** . ::***:*::** :    ::       :****  *

AT2G41690.1     LFGVKLE---------------------------
pt006984_POPTR_ LFGVRLEVEGEREKKRKRAEIRESATILLSQ---
pt044842_POPTR_ LFGVRLEAEGDRERKRKRAEISESASILLSQSCI
                ****:**
BoxShade v3.31 C (beta, 970507) Output
AT2G41690.1     - M E D A G - - E H L R C N D N V N D E E R L P L E F M I G N S T S T A E L Q P P P P F L V K T Y K V V E D P T T D G V
pt006984_POPTR_    M A D D K G L L E Y V R - - - - - - - - - - - - - - - - - - K S T - - - - - - - P P P F L L K T Y M L V E D L A T D D V
pt044842_POPTR_    M A N D K G L L E Y V R - - - - - - - - - - - - - - - - - - K S T - - - - - - - P P P F L L K T Y M L V E D P A T D E V
 
AT2G41690.1     I S W N E Y G T G F V V W Q P A E F A R D L L P T L F K H C N F S S F V R Q L N T Y G F R K V T T I R W E F S N E M F R
pt006984_POPTR_    I S W N G E G T G F V V W Q P A E F S R D L L P T L F K H S N F S S F V R Q L N T Y G F R K V A T S R W E F C N D M F R
pt044842_POPTR_    I S W N E E G T G F V V W Q P A E F A R D L L P T L F K H S N F S S F V R Q L N T Y G F R K V A T S R W E F C N D M F R
 
AT2G41690.1     K G Q R E L M S N I R R R K S Q H W S H N K S N H Q V V P T T T M V N Q E G H Q R I G I D H H H E D Q Q S S A T S S S F
pt006984_POPTR_    K G E R E L L R Q I R R R K A - - W T N K Q - - Q P I A P L I Q V A P Q E - - - - - - - - - F E E D Q R S S S T L S S S
pt044842_POPTR_    K G E R E L L C Q I R R R K A - - W S S K Q - - Q P I A P - I Q V T T Q E - - - - - - - - - F E E D Q R S S S T S S S S
 
AT2G41690.1     V Y T A L L D E N K C L K N E N E L L S C E L G K T K K K C K Q L M E L V E R Y R G E D E D A T D E S D D E E D E G L K
pt006984_POPTR_    E Y T S L V D E N K R L K K E N G V L S T E L T S M K R K C K E L L D L V A K N A H L E K - - - - - - - E E E D E R P K
pt044842_POPTR_    E Y T T L V D E N K R L K K E N G V L S T E L T S M N R K C K E L L D L V A K Y A H L E K - - - - - - - E E E D E R P K
 
AT2G41690.1     L F G V K L E - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt006984_POPTR_    L F G V R L E V E G E R E K K R K R A E I R E S A T I L L S Q - - -
pt044842_POPTR_    L F G V R L E A E G D R E R K R K R A E I S E S A S I L L S Q S C I
 
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