fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41690.1 EDEGLKLFGVKLE at 236/244 in AT2G41690.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006953 not found in 231aa AT2G41690.1 not_1st 0.439746300 II
Gm052032 not found in 233aa AT2G41690.1 not_1st 0.435517970 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G41690.1     MEDAGEH--LRCNDNVNDEERLPLEFMIGNSTSTAELQPPPPFLVKTYKVVEDPTTDGVI
gm052032_Glyma1 MEGTSNKGLLECGRKCT----------------------PPPFLLKTYMLVEDPATDDVI
gm006953_Glyma0 MEGTSEKGLWECGRKCT----------------------PPPFLLKTYMLVDDPATDDVV
                **.:.::   .*. : .                      *****:*** :*:**:**.*:

AT2G41690.1     SWNEYGTGFVVWQPAEFARDLLPTLFKHCNFSSFVRQLNTY--GFRKVTTIRWEFSNEMF
gm052032_Glyma1 SWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNTYVRGFRKVATSRWEFFNDKF
gm006953_Glyma0 SWNSEGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTY--GFRKIATSRWEFFNDRF
                ***  **.******.*************.************  ****::* **** *: *

AT2G41690.1     RKGQRELMSNIRRRKSQHWSHNKSNHQVVPTTTMVNQEGHQRIGIDHHHEDQQSSATSSS
gm052032_Glyma1 KKGERELLHEIRRRKA--WSSKQQ-----PNAP--NQGTPQ-----DSDEDQRSSSTSSS
gm006953_Glyma0 KKGERELLHEIRRRKA--WTSKQQ-----PKAP--NQATLQ-----DSDEDQRSSSISSS
                :**:***: :*****:  *: ::.     *.:.  **   *     . .***:**: ***

AT2G41690.1     FVYTALLDENKCLKNENELLSCELGKTKKKCKQLMELVERYRGEDEDATDESDDEEDEGL
gm052032_Glyma1 FGYTTLVDENKRLKKENGVLNSELTSMKRKCKELLDLVATY------SSHAKEEKKDERP
gm006953_Glyma0 SGYTTLVDENKRLKKENGVLNSELTSMKRKCKELLDLVAKY------SSHAKEEKEDERP
                  **:*:**** **:** :*..** . *:***:*::**  *      ::. .::::**  

AT2G41690.1     KLFGVKLE---------------------------
gm052032_Glyma1 MLFGVRLEVQGGREMKRNRAEMSESTSIMLSQSCK
gm006953_Glyma0 MLFGVRLDVQGEREMKRHRAEMSESASIMLSQSCK
                 ****:*:
BoxShade v3.31 C (beta, 970507) Output
AT2G41690.1     M E D A G E H - - L R C N D N V N D E E R L P L E F M I G N S T S T A E L Q P P P P F L V K T Y K V V E D P T T D G V I
gm052032_Glyma1    M E G T S N K G L L E C G R K C T - - - - - - - - - - - - - - - - - - - - - - P P P F L L K T Y M L V E D P A T D D V I
gm006953_Glyma0    M E G T S E K G L W E C G R K C T - - - - - - - - - - - - - - - - - - - - - - P P P F L L K T Y M L V D D P A T D D V V
 
AT2G41690.1     S W N E Y G T G F V V W Q P A E F A R D L L P T L F K H C N F S S F V R Q L N T Y - - G F R K V T T I R W E F S N E M F
gm052032_Glyma1    S W N A K G T A F V V W Q P P E F A R D L L P T L F K H S N F S S F V R Q L N T Y V R G F R K V A T S R W E F F N D K F
gm006953_Glyma0    S W N S E G T A F V V W Q P A E F A R D L L P T L F K H S N F S S F V R Q L N T Y - - G F R K I A T S R W E F F N D R F
 
AT2G41690.1     R K G Q R E L M S N I R R R K S Q H W S H N K S N H Q V V P T T T M V N Q E G H Q R I G I D H H H E D Q Q S S A T S S S
gm052032_Glyma1    K K G E R E L L H E I R R R K A - - W S S K Q Q - - - - - P N A P - - N Q G T P Q - - - - - D S D E D Q R S S S T S S S
gm006953_Glyma0    K K G E R E L L H E I R R R K A - - W T S K Q Q - - - - - P K A P - - N Q A T L Q - - - - - D S D E D Q R S S S I S S S
 
AT2G41690.1     F V Y T A L L D E N K C L K N E N E L L S C E L G K T K K K C K Q L M E L V E R Y R G E D E D A T D E S D D E E D E G L
gm052032_Glyma1    F G Y T T L V D E N K R L K K E N G V L N S E L T S M K R K C K E L L D L V A T Y - - - - - - S S H A K E E K K D E R P
gm006953_Glyma0    S G Y T T L V D E N K R L K K E N G V L N S E L T S M K R K C K E L L D L V A K Y - - - - - - S S H A K E E K E D E R P
 
AT2G41690.1     K L F G V K L E - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm052032_Glyma1    M L F G V R L E V Q G G R E M K R N R A E M S E S T S I M L S Q S C K
gm006953_Glyma0    M L F G V R L D V Q G E R E M K R H R A E M S E S A S I M L S Q S C K
 
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