fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41690.1 EDEGLKLFGVKLE at 236/244 in AT2G41690.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052033 not found in 231aa AT2G41690.1 1st_1st 0.446088794 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G41690.1     MEDAGEH--LRCNDNVNDEERLPLEFMIGNSTSTAELQPPPPFLVKTYKVVEDPTTDGVI
gm052033_Glyma1 MEGTSNKGLLECGRKCT----------------------PPPFLLKTYMLVEDPATDDVI
                **.:.::  *.*. : .                      *****:*** :****:**.**

AT2G41690.1     SWNEYGTGFVVWQPAEFARDLLPTLFKHCNFSSFVRQLNTYGFRKVTTIRWEFSNEMFRK
gm052033_Glyma1 SWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFFNDKFKK
                ***  **.******.*************.*****************:* **** *: *:*

AT2G41690.1     GQRELMSNIRRRKSQHWSHNK---SNHQVVPTTTMVNQEGHQRIGIDHHHEDQQSSATSS
gm052033_Glyma1 GERELLHEIRRRKA--WSSKQQPNAPNQGTPQDS---------------DEDQRSSSTSS
                *:***: :*****:  ** ::   : :* .*  :               .***:**:***

AT2G41690.1     SFVYTALLDENKCLKNENELLSCELGKTKKKCKQLMELVERYRGEDEDATDESDDEEDEG
gm052033_Glyma1 SFGYTTLVDENKRLKKENGVLNSELTSMKRKCKELLDLVATY------SSHAKEEKKDER
                ** **:*:**** **:** :*..** . *:***:*::**  *      ::. .::::** 

AT2G41690.1     LKLFGVKLE---------------------------
gm052033_Glyma1 PMLFGVRLEVQGGREMKRNRAEMSESTSIMLSQSCK
                  ****:**
BoxShade v3.31 C (beta, 970507) Output
AT2G41690.1     M E D A G E H - - L R C N D N V N D E E R L P L E F M I G N S T S T A E L Q P P P P F L V K T Y K V V E D P T T D G V I
gm052033_Glyma1    M E G T S N K G L L E C G R K C T - - - - - - - - - - - - - - - - - - - - - - P P P F L L K T Y M L V E D P A T D D V I
 
AT2G41690.1     S W N E Y G T G F V V W Q P A E F A R D L L P T L F K H C N F S S F V R Q L N T Y G F R K V T T I R W E F S N E M F R K
gm052033_Glyma1    S W N A K G T A F V V W Q P P E F A R D L L P T L F K H S N F S S F V R Q L N T Y G F R K V A T S R W E F F N D K F K K
 
AT2G41690.1     G Q R E L M S N I R R R K S Q H W S H N K - - - S N H Q V V P T T T M V N Q E G H Q R I G I D H H H E D Q Q S S A T S S
gm052033_Glyma1    G E R E L L H E I R R R K A - - W S S K Q Q P N A P N Q G T P Q D S - - - - - - - - - - - - - - - D E D Q R S S S T S S
 
AT2G41690.1     S F V Y T A L L D E N K C L K N E N E L L S C E L G K T K K K C K Q L M E L V E R Y R G E D E D A T D E S D D E E D E G
gm052033_Glyma1    S F G Y T T L V D E N K R L K K E N G V L N S E L T S M K R K C K E L L D L V A T Y - - - - - - S S H A K E E K K D E R
 
AT2G41690.1     L K L F G V K L E - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm052033_Glyma1    P M L F G V R L E V Q G G R E M K R N R A E M S E S T S I M L S Q S C K
 
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