fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb018579 not found in 393aa AT2G41710.1 1st_1st 0.381024096 Ib
Gm006957 not found in 420aa AT2G41710.1 1st_1st 0.614457831 Ia
Gm052035 not found in 413aa AT2G41710.1 not_1st 0.606927710 II
Gm004427 not found in 447aa AT2G41710.1 not_1st 0.537650602 II
Pt006778 not found in 431aa AT2G41710.1 1st_1st 0.628012048 Ia
Pt043912 not found in 504aa AT2G41710.1 not_1st 0.618975903 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G41710.1     ------------------------------------------------------------
gm004427_Glyma0 ----------METHPHYISKAFSL----TNVRV---------------------------
gm006957_Glyma0 ------------------------------------------------------------
pt006778_POPTR_ ------------------------------------------------------------
gm052035_Glyma1 ------------------------------------------------------------
pt043912_POPTR_ MLFQKPLSYHITPHPLLTVMRFTLQQPQNNIVISKPIKDIPVISPSPLATSGKNQQSKRC
Sb018579_Sorbi1 ------------------------------------------------------------
                                                                            

AT2G41710.1     ---------------MASVSSSDQGPKTEAG------------CSGGGGGESSE------
gm004427_Glyma0 -----RLGLVWFTS-MAS-SSSDP------------GKS----EADGSSETLSE------
gm006957_Glyma0 ---------------MAS-SSSDP----------------------GKSAETSEA----A
pt006778_POPTR_ ---------------MAS-SSD-PVLKPEIGGGVCGGGSGG-CGGGGGGGESSE------
gm052035_Glyma1 ---------------MAS-SSSDP----------------------GKSAETSE-----A
pt043912_POPTR_ FLCNSQFGFFFLDQIMAS-SSSHPVLKPEIGGVGCGGGS-----SGGGGGESSE------
Sb018579_Sorbi1 ---------------MAS-----PNPEAAAG-----LQTVAVAAGGGEGGSSSSLGAVAG
                               ***                            * .   *.      

AT2G41710.1     -TVAASDQMLLYRGFKKAKKERGCTAKERISKMPPCTAGKRSSIYRGVTRHRWTGRYEAH
gm004427_Glyma0 ATAAAKDGQLR---MKKAKKERVCTAKERISKMPPCAVGKRSSIYRGVTRHRWTGRYEAH
gm006957_Glyma0 ALAVANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAH
pt006778_POPTR_ AAVIANDQLLLYRGLKKPRKERGCTAKERISKMPPCTAGKRSSIYRGVTRHRWTGRYEAH
gm052035_Glyma1 AVVVANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAH
pt043912_POPTR_ AAVIANDQLLLYRGLKKPKKERGCTAKERISKMPPCTAGKRSSIYRGVTRHRWTGRYEAH
Sb018579_Sorbi1 AAAVSSSGELVPRRSLAVRKERVCTAKERISRMPPCAAGKRSSIYRGVTRHRWTGRYEAH
                  . :..  *        :*** ********:****:.**********************

AT2G41710.1     LWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEE
gm004427_Glyma0 LWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALRYWGPSALINFPVTDYARDLEE
gm006957_Glyma0 LWDKSTWNQNQNKKGKQ---GAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYARDLEE
pt006778_POPTR_ LWDKSTWNQNQNKKGKQ---GAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEE
gm052035_Glyma1 LWDKSTWNQNQNKKGKQ---GAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEE
pt043912_POPTR_ LWDKSTWNQNQNKKGKQ---GAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYKRDLEE
Sb018579_Sorbi1 LWDKSTWNQNQNKKGKQ---GAYDDEEAAARAYDLAALKYWGAGTQINFPVSDYARDLEE
                *****************   ******************:***..: *****:** *****

AT2G41710.1     MQNLSREEYLASLRRKSSGFSRGIAKYRGLQSRWDASASRMPGPEYFSNIHYGAGDDRGT
gm004427_Glyma0 MQNVSREEYLASLRRKSSGFSRGLSKYRGLSSRWNPTYGRMAGSDYFNSRYY--GEDSAA
gm006957_Glyma0 MQNVSREEYLASLRRKSSGFSRGLAKYRGLSSRWDPTYGRMSGSDYFNSMHYGAGDDSAA
pt006778_POPTR_ MQNVSREEYLASLRRKSSGFSRGISKYRALSSRWDSSYSRVPGSEYFSNVNYGAGDDQAA
gm052035_Glyma1 MQNVSREEYLASLRRKSSGFSRGLAKYRGLSSRWDPSYGRMSGSDYFNSMHY--GDDSAA
pt043912_POPTR_ MQNVSREEYLASLRRKSSGFSRGLSKYRALSSRWDSSCSRMPGSEYCSSVNY--GDDHAA
Sb018579_Sorbi1 MQMISKEDYLVSLRRQLH------------NSRWDTSLGL--GNDYMS---LSCGKDIML
                ** :*:*:**.****:              .***:.: .   * :* .      *.*   

AT2G41710.1     EGDFLGSFCLERKIDLTGYIKWWGANKNRQPESSSKASEDAN---VEDAGTELKTLEHTS
gm004427_Glyma0 ETKYLSSFCIERKIDLTSYIKWWGSNKSQQPDSRVRFSDVRKHGFAGDFCIEHKTLEQNV
gm006957_Glyma0 ESEYVSGFCLDRKIDLTSHIKWWGSNKSRHSDAGTRLSEEKKLGSAGDVCSELKQLEQKV
pt006778_POPTR_ ESEY--SFCIERKIDLTGYIKWWGSNKTSLAESMTKSSEDTKHGCADDIGSELKTTEREV
gm052035_Glyma1 ESEYVSGFCIERKIDLTSHIKWWGSNKSRHSDAGTRLSEEKKLGSAGDICIEIKQLEQKV
pt043912_POPTR_ ESEYGGSFCIERKIDLTGYIKWWNSHSTRQVESIMKSSEDTKHGCPDDIGSELKTSEREV
Sb018579_Sorbi1 DGKFAGSFGLERKIDLTNYIRWWLPKKTRQSDTSK----------TEEIADEIRAIESSM
                : .:  .* ::******.:*:** .:..   ::              :   * :  *   

AT2G41710.1     HATEPYKAPNLGVLCGTQRKEKEISSPSSS--SALSILSQSPAFKSLEEKVLKIQESCNN
gm004427_Glyma0 HPSEPYQLLALGMPCERIKHEH-----SSV--SALSIVLQSAAYKNLQQRASTRQEN-SN
gm006957_Glyma0 QPMEPYQMPQLGRLHNEKKHRS-----SSL--SALSILSQSAAYKSLQEKASKRQEN-ST
pt006778_POPTR_ QCTEPYQMPRLGLSVEGKRHKG-----SKI--SALSILSQSAAYKNLQEKASKKQET-VT
gm052035_Glyma1 QPTAPYQMPQLGRPQNEKKHRS-----SSV--SALSILSQSAAYKSLQEKASKTLEN-II
pt043912_POPTR_ KCTQPYQMPHLGLSVEGKGHTR-----STI--SALSILSQSAAYKSLQEKASKKQET-ST
Sb018579_Sorbi1 QQTEPYKLPSLGLGSPSK--------PSSVGLSACSILSQSDAFKSFLEKSTKLSEECT-
                :   **:   **               *.   ** **: ** *:*.: ::  .  *    

AT2G41710.1     ENDENANRNI-INMEKNNGKAIEKPVVSHG------VALGGAAALSLQKSMYPLTSLLTA
gm004427_Glyma0 YNDENENKDTIIN-KLDHGKAAEKSLNNDGGNERLDIAMGMSGSLPLQRNVYPPASLLIA
gm006957_Glyma0 DNDENENKNT-IN-KLDHGKAVEKPSNHDGGNDRLNIAMGMSGTMSLQRNAYPLTPFLSA
pt006778_POPTR_ ENDENENRNN-IN-KMDHGKAVEKSTSHDSNSERLGAALGMTGGLSLQRNV-PLTPFLSA
gm052035_Glyma1 DNDENENKNT-IN-KLDHGKAVEKPSNHDGGNDRLDIATGMSGTMSLQRNVYPLTPFLSA
pt043912_POPTR_ ENDENENKNS-VN-KMDRGKAVEKSTSHDGCSERLGATLGITGGLSLQRNVYPSTPFLSA
Sb018579_Sorbi1 -----------LSKEIVEGKTVASVPATGYDTGAININMN---ELLVQRSTYSMAPVMPT
                           :. :  .**:  .               .    : :*:.  . :..: :

AT2G41710.1     PLLTNYNTLDPLADPILWT---PFLPSGSSLT-SEVTKT----ETSCSTYS-YLPQEK
gm004427_Glyma0 PLLTAYNTVDPSVDPVLWTPQVPILSAGLSGV-AEVAKT----ETS-STYTIFQPDE-
gm006957_Glyma0 PLLTAYNTVDPLVDPVLWTSLVPMLPAGLSRT-AEVTKTETSLETS-STYTMFQPEE-
pt006778_POPTR_ PLLTNYNTIDPLVDPILWTSLVPALPTGLSRN-PEVTKT----ETS-STYSFFRPEE-
gm052035_Glyma1 PLLTAYNTVDPLVDPVLWTSLVPMLPAGLSHT-AEVTKT----ETS-STYTMFRPEE-
pt043912_POPTR_ PLLTNYNTIDPLVDPILWTSLVPALPTGLSRN-PEVTKT----ETI-STYSFFRPEE-
Sb018579_Sorbi1 PMKTTWSPADPSVDPLFWSNFV--LPSSQPVTMATITTT-TN-EVS-SSDP-FQSQE-
                *: * :.. ** .**::*:     *.:. .   . ::.*    *.  *: . : .:*
BoxShade v3.31 C (beta, 970507) Output
AT2G41710.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm004427_Glyma0    - - - - - - - - - - M E T H P H Y I S K A F S L - - - - T N V R V - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm006957_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt006778_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm052035_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt043912_POPTR_    M L F Q K P L S Y H I T P H P L L T V M R F T L Q Q P Q N N I V I S K P I K D I P V I S P S P L A T S G K N Q Q S K R C
Sb018579_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G41710.1     - - - - - - - - - - - - - - - M A S V S S S D Q G P K T E A G - - - - - - - - - - - - C S G G G G G E S S E - - - - - -
gm004427_Glyma0    - - - - - R L G L V W F T S - M A S - S S S D P - - - - - - - - - - - - G K S - - - - E A D G S S E T L S E - - - - - -
gm006957_Glyma0    - - - - - - - - - - - - - - - M A S - S S S D P - - - - - - - - - - - - - - - - - - - - - - G K S A E T S E A - - - - A
pt006778_POPTR_    - - - - - - - - - - - - - - - M A S - S S D - P V L K P E I G G G V C G G G S G G - C G G G G G G G E S S E - - - - - -
gm052035_Glyma1    - - - - - - - - - - - - - - - M A S - S S S D P - - - - - - - - - - - - - - - - - - - - - - G K S A E T S E - - - - - A
pt043912_POPTR_    F L C N S Q F G F F F L D Q I M A S - S S S H P V L K P E I G G V G C G G G S - - - - - S G G G G G E S S E - - - - - -
Sb018579_Sorbi1    - - - - - - - - - - - - - - - M A S - - - - - P N P E A A A G - - - - - L Q T V A V A A G G G E G G S S S S L G A V A G
 
AT2G41710.1     - T V A A S D Q M L L Y R G F K K A K K E R G C T A K E R I S K M P P C T A G K R S S I Y R G V T R H R W T G R Y E A H
gm004427_Glyma0    A T A A A K D G Q L R - - - M K K A K K E R V C T A K E R I S K M P P C A V G K R S S I Y R G V T R H R W T G R Y E A H
gm006957_Glyma0    A L A V A N D Q L L L Y R G L K K A K K E R G C T A K E R I S K M P P C A A G K R S S I Y R G V T R H R W T G R Y E A H
pt006778_POPTR_    A A V I A N D Q L L L Y R G L K K P R K E R G C T A K E R I S K M P P C T A G K R S S I Y R G V T R H R W T G R Y E A H
gm052035_Glyma1    A V V V A N D Q L L L Y R G L K K A K K E R G C T A K E R I S K M P P C A A G K R S S I Y R G V T R H R W T G R Y E A H
pt043912_POPTR_    A A V I A N D Q L L L Y R G L K K P K K E R G C T A K E R I S K M P P C T A G K R S S I Y R G V T R H R W T G R Y E A H
Sb018579_Sorbi1    A A A V S S S G E L V P R R S L A V R K E R V C T A K E R I S R M P P C A A G K R S S I Y R G V T R H R W T G R Y E A H
 
AT2G41710.1     L W D K S T W N Q N Q N K K G K Q V Y L G A Y D D E E A A A R A Y D L A A L K Y W G P G T L I N F P V T D Y T R D L E E
gm004427_Glyma0    L W D K S T W N Q N Q N K K G K Q V Y L G A Y D D E E A A A R A Y D L A A L R Y W G P S A L I N F P V T D Y A R D L E E
gm006957_Glyma0    L W D K S T W N Q N Q N K K G K Q - - - G A Y D D E E A A A R A Y D L A A L K Y W G P G T L I N F P V T D Y A R D L E E
pt006778_POPTR_    L W D K S T W N Q N Q N K K G K Q - - - G A Y D D E E A A A R A Y D L A A L K Y W G P G T L I N F P V T D Y T R D L E E
gm052035_Glyma1    L W D K S T W N Q N Q N K K G K Q - - - G A Y D D E E A A A R A Y D L A A L K Y W G P G T L I N F P V T D Y T R D L E E
pt043912_POPTR_    L W D K S T W N Q N Q N K K G K Q - - - G A Y D D E E A A A R A Y D L A A L K Y W G P G T L I N F P V T D Y K R D L E E
Sb018579_Sorbi1    L W D K S T W N Q N Q N K K G K Q - - - G A Y D D E E A A A R A Y D L A A L K Y W G A G T Q I N F P V S D Y A R D L E E
 
AT2G41710.1     M Q N L S R E E Y L A S L R R K S S G F S R G I A K Y R G L Q S R W D A S A S R M P G P E Y F S N I H Y G A G D D R G T
gm004427_Glyma0    M Q N V S R E E Y L A S L R R K S S G F S R G L S K Y R G L S S R W N P T Y G R M A G S D Y F N S R Y Y - - G E D S A A
gm006957_Glyma0    M Q N V S R E E Y L A S L R R K S S G F S R G L A K Y R G L S S R W D P T Y G R M S G S D Y F N S M H Y G A G D D S A A
pt006778_POPTR_    M Q N V S R E E Y L A S L R R K S S G F S R G I S K Y R A L S S R W D S S Y S R V P G S E Y F S N V N Y G A G D D Q A A
gm052035_Glyma1    M Q N V S R E E Y L A S L R R K S S G F S R G L A K Y R G L S S R W D P S Y G R M S G S D Y F N S M H Y - - G D D S A A
pt043912_POPTR_    M Q N V S R E E Y L A S L R R K S S G F S R G L S K Y R A L S S R W D S S C S R M P G S E Y C S S V N Y - - G D D H A A
Sb018579_Sorbi1    M Q M I S K E D Y L V S L R R Q L H - - - - - - - - - - - - N S R W D T S L G L - - G N D Y M S - - - L S C G K D I M L
 
AT2G41710.1     E G D F L G S F C L E R K I D L T G Y I K W W G A N K N R Q P E S S S K A S E D A N - - - V E D A G T E L K T L E H T S
gm004427_Glyma0    E T K Y L S S F C I E R K I D L T S Y I K W W G S N K S Q Q P D S R V R F S D V R K H G F A G D F C I E H K T L E Q N V
gm006957_Glyma0    E S E Y V S G F C L D R K I D L T S H I K W W G S N K S R H S D A G T R L S E E K K L G S A G D V C S E L K Q L E Q K V
pt006778_POPTR_    E S E Y - - S F C I E R K I D L T G Y I K W W G S N K T S L A E S M T K S S E D T K H G C A D D I G S E L K T T E R E V
gm052035_Glyma1    E S E Y V S G F C I E R K I D L T S H I K W W G S N K S R H S D A G T R L S E E K K L G S A G D I C I E I K Q L E Q K V
pt043912_POPTR_    E S E Y G G S F C I E R K I D L T G Y I K W W N S H S T R Q V E S I M K S S E D T K H G C P D D I G S E L K T S E R E V
Sb018579_Sorbi1    D G K F A G S F G L E R K I D L T N Y I R W W L P K K T R Q S D T S K - - - - - - - - - - T E E I A D E I R A I E S S M
 
AT2G41710.1     H A T E P Y K A P N L G V L C G T Q R K E K E I S S P S S S - - S A L S I L S Q S P A F K S L E E K V L K I Q E S C N N
gm004427_Glyma0    H P S E P Y Q L L A L G M P C E R I K H E H - - - - - S S V - - S A L S I V L Q S A A Y K N L Q Q R A S T R Q E N - S N
gm006957_Glyma0    Q P M E P Y Q M P Q L G R L H N E K K H R S - - - - - S S L - - S A L S I L S Q S A A Y K S L Q E K A S K R Q E N - S T
pt006778_POPTR_    Q C T E P Y Q M P R L G L S V E G K R H K G - - - - - S K I - - S A L S I L S Q S A A Y K N L Q E K A S K K Q E T - V T
gm052035_Glyma1    Q P T A P Y Q M P Q L G R P Q N E K K H R S - - - - - S S V - - S A L S I L S Q S A A Y K S L Q E K A S K T L E N - I I
pt043912_POPTR_    K C T Q P Y Q M P H L G L S V E G K G H T R - - - - - S T I - - S A L S I L S Q S A A Y K S L Q E K A S K K Q E T - S T
Sb018579_Sorbi1    Q Q T E P Y K L P S L G L G S P S K - - - - - - - - P S S V G L S A C S I L S Q S D A F K S F L E K S T K L S E E C T -
 
AT2G41710.1     E N D E N A N R N I - I N M E K N N G K A I E K P V V S H G - - - - - - V A L G G A A A L S L Q K S M Y P L T S L L T A
gm004427_Glyma0    Y N D E N E N K D T I I N - K L D H G K A A E K S L N N D G G N E R L D I A M G M S G S L P L Q R N V Y P P A S L L I A
gm006957_Glyma0    D N D E N E N K N T - I N - K L D H G K A V E K P S N H D G G N D R L N I A M G M S G T M S L Q R N A Y P L T P F L S A
pt006778_POPTR_    E N D E N E N R N N - I N - K M D H G K A V E K S T S H D S N S E R L G A A L G M T G G L S L Q R N V - P L T P F L S A
gm052035_Glyma1    D N D E N E N K N T - I N - K L D H G K A V E K P S N H D G G N D R L D I A T G M S G T M S L Q R N V Y P L T P F L S A
pt043912_POPTR_    E N D E N E N K N S - V N - K M D R G K A V E K S T S H D G C S E R L G A T L G I T G G L S L Q R N V Y P S T P F L S A
Sb018579_Sorbi1    - - - - - - - - - - - L S K E I V E G K T V A S V P A T G Y D T G A I N I N M N - - - E L L V Q R S T Y S M A P V M P T
 
AT2G41710.1     P L L T N Y N T L D P L A D P I L W T - - - P F L P S G S S L T - S E V T K T - - - - E T S C S T Y S - Y L P Q E K
gm004427_Glyma0    P L L T A Y N T V D P S V D P V L W T P Q V P I L S A G L S G V - A E V A K T - - - - E T S - S T Y T I F Q P D E -
gm006957_Glyma0    P L L T A Y N T V D P L V D P V L W T S L V P M L P A G L S R T - A E V T K T E T S L E T S - S T Y T M F Q P E E -
pt006778_POPTR_    P L L T N Y N T I D P L V D P I L W T S L V P A L P T G L S R N - P E V T K T - - - - E T S - S T Y S F F R P E E -
gm052035_Glyma1    P L L T A Y N T V D P L V D P V L W T S L V P M L P A G L S H T - A E V T K T - - - - E T S - S T Y T M F R P E E -
pt043912_POPTR_    P L L T N Y N T I D P L V D P I L W T S L V P A L P T G L S R N - P E V T K T - - - - E T I - S T Y S F F R P E E -
Sb018579_Sorbi1    P M K T T W S P A D P S V D P L F W S N F V - - L P S S Q P V T M A T I T T T - T N - E V S - S S D P - F Q S Q E -
 
0