fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052035 not found in 413aa AT2G41710.1 not_1st 0.606927710 II
Gm004427 not found in 447aa AT2G41710.1 not_1st 0.537650602 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G41710.1     ----------------------------MASVSSSDQGPKTEAGCSGGGGGESSET----
gm052035_Glyma1 ----------------------------MAS-SSSDPG-K------------SAET-SEA
gm004427_Glyma0 METHPHYISKAFSLTNVRVRLGLVWFTSMAS-SSSDPG-KSEA-------DGSSETLSEA
                                            *** **** * *            *:**    

AT2G41710.1     --VAASDQMLLYRGFKKAKKERGCTAKERISKMPPCTAGKRSSIYRGVTRHRWTGRYEAH
gm052035_Glyma1 AVVVANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAH
gm004427_Glyma0 TAAAKDGQLR----MKKAKKERVCTAKERISKMPPCAVGKRSSIYRGVTRHRWTGRYEAH
                  .. ..*:     :******* *************:.**********************

AT2G41710.1     LWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEE
gm052035_Glyma1 LWDKSTWNQNQNKKGKQ---GAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEE
gm004427_Glyma0 LWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALRYWGPSALINFPVTDYARDLEE
                *****************   ******************:****.:*********:*****

AT2G41710.1     MQNLSREEYLASLRRKSSGFSRGIAKYRGLQSRWDASASRMPGPEYFSNIHYGAGDDRGT
gm052035_Glyma1 MQNVSREEYLASLRRKSSGFSRGLAKYRGLSSRWDPSYGRMSGSDYFNSMHY--GDDSAA
gm004427_Glyma0 MQNVSREEYLASLRRKSSGFSRGLSKYRGLSSRWNPTYGRMAGSDYFNSRYY--GEDSAA
                ***:*******************::*****.***:.: .**.*.:**.. :*  *:* .:

AT2G41710.1     EGDFLGSFCLERKIDLTGYIKWWGANKNRQPESSSKASEDANVEDAG---TELKTLEHTS
gm052035_Glyma1 ESEYVSGFCIERKIDLTSHIKWWGSNKSRHSDAGTRLSEEKKLGSAGDICIEIKQLEQKV
gm004427_Glyma0 ETKYLSSFCIERKIDLTSYIKWWGSNKSQQPDSRVRFSDVRKHGFAGDFCIEHKTLEQNV
                * .::..**:*******.:*****:**.::.::  : *:  :   **    * * **:. 

AT2G41710.1     HATEPYKAPNLGVLCGTQRKEKEISSPSSSSALSILSQSPAFKSLEEKVLKIQESCNNEN
gm052035_Glyma1 QPTAPYQMPQLGRPQNEKKHRS-----SSVSALSILSQSAAYKSLQEKASKTLENI-IDN
gm004427_Glyma0 HPSEPYQLLALGMPCERIKHEH-----SSVSALSIVLQSAAYKNLQQRASTRQENS-NYN
                :.: **:   **      ::.      ** *****: **.*:*.*:::. .  *.    *

AT2G41710.1     DENANRNI-INMEKNNGKAIEKPVVSHG------VALGGAAALSLQKSMYPLTSLLTAPL
gm052035_Glyma1 DENENKNT-IN-KLDHGKAVEKPSNHDGGNDRLDIATGMSGTMSLQRNVYPLTPFLSAPL
gm004427_Glyma0 DENENKDTIIN-KLDHGKAAEKSLNNDGGNERLDIAMGMSGSLPLQRNVYPPASLLIAPL
                *** *::  ** : ::*** **.   .*      :* * :.::.**:.:** :.:* ***

AT2G41710.1     LTNYNTLDPLADPILWT---PFLPSGSSLTSEVTKTETSCSTYS-YLPQEK
gm052035_Glyma1 LTAYNTVDPLVDPVLWTSLVPMLPAGLSHTAEVTKTETS-STYTMFRPEE-
gm004427_Glyma0 LTAYNTVDPSVDPVLWTPQVPILSAGLSGVAEVAKTETS-STYTIFQPDE-
                ** ***:** .**:***   *:*.:* * .:**:***** ***: : *:*
BoxShade v3.31 C (beta, 970507) Output
AT2G41710.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S V S S S D Q G P K T E A G C S G G G G G E S S E T - - - -
gm052035_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S - S S S D P G - K - - - - - - - - - - - - S A E T - S E A
gm004427_Glyma0    M E T H P H Y I S K A F S L T N V R V R L G L V W F T S M A S - S S S D P G - K S E A - - - - - - - D G S S E T L S E A
 
AT2G41710.1     - - V A A S D Q M L L Y R G F K K A K K E R G C T A K E R I S K M P P C T A G K R S S I Y R G V T R H R W T G R Y E A H
gm052035_Glyma1    A V V V A N D Q L L L Y R G L K K A K K E R G C T A K E R I S K M P P C A A G K R S S I Y R G V T R H R W T G R Y E A H
gm004427_Glyma0    T A A A K D G Q L R - - - - M K K A K K E R V C T A K E R I S K M P P C A V G K R S S I Y R G V T R H R W T G R Y E A H
 
AT2G41710.1     L W D K S T W N Q N Q N K K G K Q V Y L G A Y D D E E A A A R A Y D L A A L K Y W G P G T L I N F P V T D Y T R D L E E
gm052035_Glyma1    L W D K S T W N Q N Q N K K G K Q - - - G A Y D D E E A A A R A Y D L A A L K Y W G P G T L I N F P V T D Y T R D L E E
gm004427_Glyma0    L W D K S T W N Q N Q N K K G K Q V Y L G A Y D D E E A A A R A Y D L A A L R Y W G P S A L I N F P V T D Y A R D L E E
 
AT2G41710.1     M Q N L S R E E Y L A S L R R K S S G F S R G I A K Y R G L Q S R W D A S A S R M P G P E Y F S N I H Y G A G D D R G T
gm052035_Glyma1    M Q N V S R E E Y L A S L R R K S S G F S R G L A K Y R G L S S R W D P S Y G R M S G S D Y F N S M H Y - - G D D S A A
gm004427_Glyma0    M Q N V S R E E Y L A S L R R K S S G F S R G L S K Y R G L S S R W N P T Y G R M A G S D Y F N S R Y Y - - G E D S A A
 
AT2G41710.1     E G D F L G S F C L E R K I D L T G Y I K W W G A N K N R Q P E S S S K A S E D A N V E D A G - - - T E L K T L E H T S
gm052035_Glyma1    E S E Y V S G F C I E R K I D L T S H I K W W G S N K S R H S D A G T R L S E E K K L G S A G D I C I E I K Q L E Q K V
gm004427_Glyma0    E T K Y L S S F C I E R K I D L T S Y I K W W G S N K S Q Q P D S R V R F S D V R K H G F A G D F C I E H K T L E Q N V
 
AT2G41710.1     H A T E P Y K A P N L G V L C G T Q R K E K E I S S P S S S S A L S I L S Q S P A F K S L E E K V L K I Q E S C N N E N
gm052035_Glyma1    Q P T A P Y Q M P Q L G R P Q N E K K H R S - - - - - S S V S A L S I L S Q S A A Y K S L Q E K A S K T L E N I - I D N
gm004427_Glyma0    H P S E P Y Q L L A L G M P C E R I K H E H - - - - - S S V S A L S I V L Q S A A Y K N L Q Q R A S T R Q E N S - N Y N
 
AT2G41710.1     D E N A N R N I - I N M E K N N G K A I E K P V V S H G - - - - - - V A L G G A A A L S L Q K S M Y P L T S L L T A P L
gm052035_Glyma1    D E N E N K N T - I N - K L D H G K A V E K P S N H D G G N D R L D I A T G M S G T M S L Q R N V Y P L T P F L S A P L
gm004427_Glyma0    D E N E N K D T I I N - K L D H G K A A E K S L N N D G G N E R L D I A M G M S G S L P L Q R N V Y P P A S L L I A P L
 
AT2G41710.1     L T N Y N T L D P L A D P I L W T - - - P F L P S G S S L T S E V T K T E T S C S T Y S - Y L P Q E K
gm052035_Glyma1    L T A Y N T V D P L V D P V L W T S L V P M L P A G L S H T A E V T K T E T S - S T Y T M F R P E E -
gm004427_Glyma0    L T A Y N T V D P S V D P V L W T P Q V P I L S A G L S G V A E V A K T E T S - S T Y T I F Q P D E -
 
0