fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41835.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm019490 not found in 136aa AT2G41835.1 1st_1st 0.330388692 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G41835.1     MGTPEFPDLGKHCSVDVCKQIDFLPFTCDRCLQVFCLDHRSYMKHSCPKGDREDVTVVIC
Sm019490_Selmo1 -GTEAFPNLGKHCSHSSCGQLDFLPFKCDACSQVFCLDHRSYTAHECPKAGAKDSTVIVC
                 **  **:****** . * *:*****.** * **********  *.***.. :* **::*

AT2G41835.1     PLCAKGVRLNPNEDPNITWEKHVNTDCDPSNYEKATKKKKCPVPRCKEYLTFSNTIKCRD
Sm019490_Selmo1 PFCASGVKTVAGEDPNSTIERHLQTSCDPSNYDRVMKKPKCSVRGCKEVLTFSNKFHCKV
                *:**.**:  ..**** * *:*::*.******::. ** **.*  *** *****.::*: 

AT2G41835.1     CNVDHCLKHRFGPDHTCPGPRKLPFMGFLSSSTTRKEAKTTRPNKAHPSTSSSSSSSRWS
Sm019490_Selmo1 CSKNTCMKHRFPADHAC-------------------------------------------
                *. : *:**** .**:*                                           

AT2G41835.1     NLLSSAEAGISRLGNDISQKLQFSSSKDNGIVEVCPQCGAKFSSVTSLVEHVEKTHERNK
Sm019490_Selmo1 ------------------------------------------------------------
                                                                            

AT2G41835.1     KQNHGNVTVDVCPRCSRGFRDPVDLVNHIERDHRGTSKA
Sm019490_Selmo1 ---------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT2G41835.1     M G T P E F P D L G K H C S V D V C K Q I D F L P F T C D R C L Q V F C L D H R S Y M K H S C P K G D R E D V T V V I C
Sm019490_Selmo1    - G T E A F P N L G K H C S H S S C G Q L D F L P F K C D A C S Q V F C L D H R S Y T A H E C P K A G A K D S T V I V C
 
AT2G41835.1     P L C A K G V R L N P N E D P N I T W E K H V N T D C D P S N Y E K A T K K K K C P V P R C K E Y L T F S N T I K C R D
Sm019490_Selmo1    P F C A S G V K T V A G E D P N S T I E R H L Q T S C D P S N Y D R V M K K P K C S V R G C K E V L T F S N K F H C K V
 
AT2G41835.1     C N V D H C L K H R F G P D H T C P G P R K L P F M G F L S S S T T R K E A K T T R P N K A H P S T S S S S S S S R W S
Sm019490_Selmo1    C S K N T C M K H R F P A D H A C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G41835.1     N L L S S A E A G I S R L G N D I S Q K L Q F S S S K D N G I V E V C P Q C G A K F S S V T S L V E H V E K T H E R N K
Sm019490_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G41835.1     K Q N H G N V T V D V C P R C S R G F R D P V D L V N H I E R D H R G T S K A
Sm019490_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
0