fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41835.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm004407 not found in 281aa AT2G41835.1 1st_1st 0.662544169 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G41835.1     MGTPEFPDLGKHCSVDVCKQIDFLPFTCDRCLQVFCLDHRSYMKHSCPKGDREDVTVVIC
gm004407_Glyma0 MGTPEFPDLGKHCAVSDCKLIDFLPFTCDRCDQVYCLEHRSYIKHLCTKADKQDVTVVIC
                *************:*. ** *********** **:**:****:** *.*.*::*******

AT2G41835.1     PLCAKGVRLNPNEDPNITWEKHVNTDCDPSNYEKATKKKKCPVPRCKEYLTFSNTIKCRD
gm004407_Glyma0 PLCAKGVRLVPDQDPNITWENHVNTECDPSNYEKVTKKKKCPVPGCREILVFSNTIKCRD
                ********* *::*******:****:********.********* *:* *.*********

AT2G41835.1     CNVDHCLKHRFGPDHTCPGPRKL----PFMGFLSSSTTRKEAKTTRPNKAHPSTSSSSSS
gm004407_Glyma0 CTVEHCLKHRFGPDHKCPGPKNVESSFSFMNLLNGS-KKQESK---------PKSSATTS
                *.*:***********.****:::    .**.:*..* .::*:*         ..**:::*

AT2G41835.1     SRW--------SNLLSSAEAGISRLGNDISQKLQFSSSKDNGIVEVCPQCGAKFSSVTSL
gm004407_Glyma0 SKWSTSFLNAASNIRASAEAGVSKLSAWQTARGGVGQSHSSGQVEQCPQCGAKFSSVTTL
                *:*        **: :*****:*:*.   : :  ...*:..* ** ************:*

AT2G41835.1     VEHVEKTHERNKKQNHGNVTVDVCPRCSRGFRDPVDLVNHIERDHRGTSKA
gm004407_Glyma0 VDHVQKVHERSGNRSGAKVTIDVCPKCSRGFRDPVALVEHVEKDHGGSSRS
                *:**:*.***. ::. .:**:****:********* **:*:*:** *:*::
BoxShade v3.31 C (beta, 970507) Output
AT2G41835.1     M G T P E F P D L G K H C S V D V C K Q I D F L P F T C D R C L Q V F C L D H R S Y M K H S C P K G D R E D V T V V I C
gm004407_Glyma0    M G T P E F P D L G K H C A V S D C K L I D F L P F T C D R C D Q V Y C L E H R S Y I K H L C T K A D K Q D V T V V I C
 
AT2G41835.1     P L C A K G V R L N P N E D P N I T W E K H V N T D C D P S N Y E K A T K K K K C P V P R C K E Y L T F S N T I K C R D
gm004407_Glyma0    P L C A K G V R L V P D Q D P N I T W E N H V N T E C D P S N Y E K V T K K K K C P V P G C R E I L V F S N T I K C R D
 
AT2G41835.1     C N V D H C L K H R F G P D H T C P G P R K L - - - - P F M G F L S S S T T R K E A K T T R P N K A H P S T S S S S S S
gm004407_Glyma0    C T V E H C L K H R F G P D H K C P G P K N V E S S F S F M N L L N G S - K K Q E S K - - - - - - - - - P K S S A T T S
 
AT2G41835.1     S R W - - - - - - - - S N L L S S A E A G I S R L G N D I S Q K L Q F S S S K D N G I V E V C P Q C G A K F S S V T S L
gm004407_Glyma0    S K W S T S F L N A A S N I R A S A E A G V S K L S A W Q T A R G G V G Q S H S S G Q V E Q C P Q C G A K F S S V T T L
 
AT2G41835.1     V E H V E K T H E R N K K Q N H G N V T V D V C P R C S R G F R D P V D L V N H I E R D H R G T S K A
gm004407_Glyma0    V D H V Q K V H E R S G N R S G A K V T I D V C P K C S R G F R D P V A L V E H V E K D H G G S S R S
 
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