fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41940.1 VQDHVSLDLHL at 251/257 in AT2G41940.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os010094 QKEGVSLDLHL in 274/279 AT2G41940.1 1st_1st 0.271149674 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G41940.1     MDETNGRRETHDFMNVNVESFSQLPFIRRTPPKEKAA--IIRLFGQELVGDNSDNLSAEP
Os010094_Os02t0 MAKPQDMR--------SVDSFSQLPFIRPAPPPQQQARDTIRLFGCEF----SNDLQLRP
                * :.:. *        .*:********* :** :: *   ***** *:    *::*. .*

AT2G41940.1     SDHQTTTKNDESSENIKDKDKEKDKDKDKDNNN--------NRRFECHYCFRNFPTSQAL
Os010094_Os02t0 TEAGAGSPDAANGSTVT---SEGSNGGDGGTKNGGAATAAAERKFECHYCCRNFPTSQAL
                ::  : : :  ....:.   .* .:. * ..:*        :*:****** *********

AT2G41940.1     GGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHHIYGFLNNHHH-----------------
Os010094_Os02t0 GGHQNAHKRERQHAKRAHLQASLAMHR-YMPGHMYGLFNYHHHIGGRFDHHPPPPPPPPP
                ****************. : : *  *: : * *:**::* ***                 

AT2G41940.1     -RHYPSWTTEARSYYGGGGHQTPSYYSRNTLAPPSSNPPTINGSPL--GLWRVPPST---
Os010094_Os02t0 PAHYPMWTSAAPGAFAGPG----------SMAQP------INGSPVQAGLWSVPPPTENF
                  *** **: * . :.* *          ::* *      *****:  *** ***.*   

AT2G41940.1     -STNTIQG------VYSSSPASAFRSHEQET------NKEPNNWPYRLMKPNV-------
Os010094_Os02t0 GSTAGRQGADKLATTVAGTPAAGEVACKDEMVPMSLLSSSPSLSSCSSTSPEMLGRCELG
                 **   **      . :.:**:.  : ::*       ...*.  .    .*::       

AT2G41940.1     -QDHVSLDLHL
Os010094_Os02t0 QKEGVSLDLHL
                 :: *******
BoxShade v3.31 C (beta, 970507) Output
AT2G41940.1     M D E T N G R R E T H D F M N V N V E S F S Q L P F I R R T P P K E K A A - - I I R L F G Q E L V G D N S D N L S A E P
Os010094_Os02t0    M A K P Q D M R - - - - - - - - S V D S F S Q L P F I R P A P P P Q Q Q A R D T I R L F G C E F - - - - S N D L Q L R P
 
AT2G41940.1     S D H Q T T T K N D E S S E N I K D K D K E K D K D K D K D N N N - - - - - - - - N R R F E C H Y C F R N F P T S Q A L
Os010094_Os02t0    T E A G A G S P D A A N G S T V T - - - S E G S N G G D G G T K N G G A A T A A A E R K F E C H Y C C R N F P T S Q A L
 
AT2G41940.1     G G H Q N A H K R E R Q H A K R G S M T S Y L H H H Q P H D P H H I Y G F L N N H H H - - - - - - - - - - - - - - - - -
Os010094_Os02t0    G G H Q N A H K R E R Q H A K R A H L Q A S L A M H R - Y M P G H M Y G L F N Y H H H I G G R F D H H P P P P P P P P P
 
AT2G41940.1     - R H Y P S W T T E A R S Y Y G G G G H Q T P S Y Y S R N T L A P P S S N P P T I N G S P L - - G L W R V P P S T - - -
Os010094_Os02t0    P A H Y P M W T S A A P G A F A G P G - - - - - - - - - - S M A Q P - - - - - - I N G S P V Q A G L W S V P P P T E N F
 
AT2G41940.1     - S T N T I Q G - - - - - - V Y S S S P A S A F R S H E Q E T - - - - - - N K E P N N W P Y R L M K P N V - - - - - - -
Os010094_Os02t0    G S T A G R Q G A D K L A T T V A G T P A A G E V A C K D E M V P M S L L S S S P S L S S C S S T S P E M L G R C E L G
 
AT2G41940.1     - Q D H V S L D L H L
Os010094_Os02t0    Q K E G V S L D L H L
 
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