fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G41940.1 VQDHVSLDLHL at 251/257 in AT2G41940.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028070 not found in 419aa AT2G41940.1 1st_1st 0.277657266 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G41940.1     MDETNGRRETHDFMNV-------------NVESFSQLPFIR--RTPPKEKAAIIRLFGQE
Sb028070_Sorbi1 ----TSSSQLEFFLGARSQPAMAKPQEVRSVDSFSQLPFIRPAPAPAQPRDATIRLFGCD
                    ..  : . *:..             .*:*********   :*.: : * ***** :

AT2G41940.1     LVGD-------NSDNLSAEPSDHQTTTKNDESSENIKDKDKEKDKDKDKDNNNNRRFECH
Sb028070_Sorbi1 FSNDQQRQAKQQQDAASDSPDNANGSTVTSESNGGAKSGGAAAAAAAAA--AAERKFECH
                : .*       :.*  * .*.: : :* ..**. . *. .             :*:****

AT2G41940.1     YCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHHIYGFLNNHHHR----
Sb028070_Sorbi1 YCCRNFPTSQALGGHQNAHKRERQHAKRAHLQASLAMHR-YVPGHMYGLFNYHHHHLGGG
                ** *************************. : : *  *: : * *:**::* ***:    

AT2G41940.1     -------------------------HYPSWTTEARS-YYGGGGHQTPSYYSRNTLAPPSS
Sb028070_Sorbi1 GGGRFVDHPGAPPPLPLPLPPPPPAHYPMWTSASPAGPYGGGG--------------PGS
                                         *** **: : :  *****              *.*

AT2G41940.1     NPPTINGSPL--GLWRVPPSTSTNT-------IQGVYSS---------------------
Sb028070_Sorbi1 MSQPINGSPVPAGLWRVPPPAATTTTAMENFGMSGRHGAGGTAIIQPTLVGPAGGEAAAC
                 . .*****:  *******.::*.*       :.* :.:                     

AT2G41940.1     ----------SPASAFRSHEQETNKEPNNWPYRLMKPNVQDHVSLDLHL
Sb028070_Sorbi1 KEEKAAMSLLSPSPSLSSC---SSTSPEKKLGRCELGHQKESVSLDLHL
                          **:.:: *    :...*::   *    : :: *******
BoxShade v3.31 C (beta, 970507) Output
AT2G41940.1     M D E T N G R R E T H D F M N V - - - - - - - - - - - - - N V E S F S Q L P F I R - - R T P P K E K A A I I R L F G Q E
Sb028070_Sorbi1    - - - - T S S S Q L E F F L G A R S Q P A M A K P Q E V R S V D S F S Q L P F I R P A P A P A Q P R D A T I R L F G C D
 
AT2G41940.1     L V G D - - - - - - - N S D N L S A E P S D H Q T T T K N D E S S E N I K D K D K E K D K D K D K D N N N N R R F E C H
Sb028070_Sorbi1    F S N D Q Q R Q A K Q Q Q D A A S D S P D N A N G S T V T S E S N G G A K S G G A A A A A A A A A - - A A E R K F E C H
 
AT2G41940.1     Y C F R N F P T S Q A L G G H Q N A H K R E R Q H A K R G S M T S Y L H H H Q P H D P H H I Y G F L N N H H H R - - - -
Sb028070_Sorbi1    Y C C R N F P T S Q A L G G H Q N A H K R E R Q H A K R A H L Q A S L A M H R - Y V P G H M Y G L F N Y H H H H L G G G
 
AT2G41940.1     - - - - - - - - - - - - - - - - - - - - - - - - - H Y P S W T T E A R S - Y Y G G G G H Q T P S Y Y S R N T L A P P S S
Sb028070_Sorbi1    G G G R F V D H P G A P P P L P L P L P P P P P A H Y P M W T S A S P A G P Y G G G G - - - - - - - - - - - - - - P G S
 
AT2G41940.1     N P P T I N G S P L - - G L W R V P P S T S T N T - - - - - - - I Q G V Y S S - - - - - - - - - - - - - - - - - - - - -
Sb028070_Sorbi1    M S Q P I N G S P V P A G L W R V P P P A A T T T T A M E N F G M S G R H G A G G T A I I Q P T L V G P A G G E A A A C
 
AT2G41940.1     - - - - - - - - - - S P A S A F R S H E Q E T N K E P N N W P Y R L M K P N V Q D H V S L D L H L
Sb028070_Sorbi1    K E E K A A M S L L S P S P S L S S C - - - S S T S P E K K L G R C E L G H Q K E S V S L D L H L
 
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