Input
| Putative repression domain
|
|
AT2G42280.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt044243 |
not found in 353aa |
AT2G42280.1 |
1st_1st |
0.439024390 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT2G42280.1 --MD--SNNHLYDPNPTGSGLLRFRSAPSSVLAAFVDDDKIGFDSDRLLSRFVTSNGVNG
pt044243_POPTR_ MPMDSSSNNNYHQQNQPSSGLLRFRSAPSSLLASFNDS---GVDNDSVLN----------
** ***: :: * ..************:**:* *. *.*.* :*.
AT2G42280.1 DLGSPKFEDKSPVSLTNTSVSYAATLPPPPQLEPSSFLGLPPHYPRQSKGIMNSVGLDQF
pt044243_POPTR_ ---YQEFEDKSAARVREEAVNYSNF--------PRSYSGLPPHYPRQGSA-TNSSAMDSS
:*****.. : : :*.*: * *: *********... ** .:*.
AT2G42280.1 LGI-----NNHHT--KPVESNLLRQSSSPAGMFTNLSDQNGYGSMRNLMNYEEDEESPSN
pt044243_POPTR_ YGLIGSISMGHHEQLKRVDPSLARQNSSPAGLFGNVSVQNGYPGW-NGTNGE------AN
*: .** * *:..* **.*****:* *:* **** . * * * :*
AT2G42280.1 SNGLRRHCSLSSRPPSSLGMLSQIPEIAPET----------------NFPYSHWNDPSSF
pt044243_POPTR_ SR-LKSQLSLSSRAPSSLGFRSQISEIGSESIEAGSPSADSRFHSSHGFPYGSWNN-SHL
*. *: : *****.*****: ***.**..*: .***. **: * :
AT2G42280.1 IDNLSSLKREAEDDGKLFL-GAQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDKYLQLQ
pt044243_POPTR_ SENFSSMKRDQE-NGNLFSNNAQNGELGNRTHVFAHHLSLPK---TSVEMVAMEKFLHLQ
:*:**:**: * :*:** .***** *** ::::******* *: :**:::*:*:**
AT2G42280.1 DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYI
pt044243_POPTR_ DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYI
*************************************************:**********
AT2G42280.1 KDLQRQYKILNDNRANCKCMNKEK----KSI
pt044243_POPTR_ KDLQKQYKTLSDNRANCKCLSKQKPVQNKIV
****:*** *.********:.*:* * :
BoxShade v3.31 C (beta, 970507) Output
AT2G42280.1 |
- |
- |
M |
D |
- |
- |
S |
N |
N |
H |
L |
Y |
D |
P |
N |
P |
T |
G |
S |
G |
L |
L |
R |
F |
R |
S |
A |
P |
S |
S |
V |
L |
A |
A |
F |
V |
D |
D |
D |
K |
I |
G |
F |
D |
S |
D |
R |
L |
L |
S |
R |
F |
V |
T |
S |
N |
G |
V |
N |
G |
pt044243_POPTR_ |
M |
P |
M |
D |
S |
S |
S |
N |
N |
N |
Y |
H |
Q |
Q |
N |
Q |
P |
S |
S |
G |
L |
L |
R |
F |
R |
S |
A |
P |
S |
S |
L |
L |
A |
S |
F |
N |
D |
S |
- |
- |
- |
G |
V |
D |
N |
D |
S |
V |
L |
N |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT2G42280.1 |
D |
L |
G |
S |
P |
K |
F |
E |
D |
K |
S |
P |
V |
S |
L |
T |
N |
T |
S |
V |
S |
Y |
A |
A |
T |
L |
P |
P |
P |
P |
Q |
L |
E |
P |
S |
S |
F |
L |
G |
L |
P |
P |
H |
Y |
P |
R |
Q |
S |
K |
G |
I |
M |
N |
S |
V |
G |
L |
D |
Q |
F |
pt044243_POPTR_ |
- |
- |
- |
Y |
Q |
E |
F |
E |
D |
K |
S |
A |
A |
R |
V |
R |
E |
E |
A |
V |
N |
Y |
S |
N |
F |
- |
- |
- |
- |
- |
- |
- |
- |
P |
R |
S |
Y |
S |
G |
L |
P |
P |
H |
Y |
P |
R |
Q |
G |
S |
A |
- |
T |
N |
S |
S |
A |
M |
D |
S |
S |
|
AT2G42280.1 |
L |
G |
I |
- |
- |
- |
- |
- |
N |
N |
H |
H |
T |
- |
- |
K |
P |
V |
E |
S |
N |
L |
L |
R |
Q |
S |
S |
S |
P |
A |
G |
M |
F |
T |
N |
L |
S |
D |
Q |
N |
G |
Y |
G |
S |
M |
R |
N |
L |
M |
N |
Y |
E |
E |
D |
E |
E |
S |
P |
S |
N |
pt044243_POPTR_ |
Y |
G |
L |
I |
G |
S |
I |
S |
M |
G |
H |
H |
E |
Q |
L |
K |
R |
V |
D |
P |
S |
L |
A |
R |
Q |
N |
S |
S |
P |
A |
G |
L |
F |
G |
N |
V |
S |
V |
Q |
N |
G |
Y |
P |
G |
W |
- |
N |
G |
T |
N |
G |
E |
- |
- |
- |
- |
- |
- |
A |
N |
|
AT2G42280.1 |
S |
N |
G |
L |
R |
R |
H |
C |
S |
L |
S |
S |
R |
P |
P |
S |
S |
L |
G |
M |
L |
S |
Q |
I |
P |
E |
I |
A |
P |
E |
T |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
N |
F |
P |
Y |
S |
H |
W |
N |
D |
P |
S |
S |
F |
pt044243_POPTR_ |
S |
R |
- |
L |
K |
S |
Q |
L |
S |
L |
S |
S |
R |
A |
P |
S |
S |
L |
G |
F |
R |
S |
Q |
I |
S |
E |
I |
G |
S |
E |
S |
I |
E |
A |
G |
S |
P |
S |
A |
D |
S |
R |
F |
H |
S |
S |
H |
G |
F |
P |
Y |
G |
S |
W |
N |
N |
- |
S |
H |
L |
|
AT2G42280.1 |
I |
D |
N |
L |
S |
S |
L |
K |
R |
E |
A |
E |
D |
D |
G |
K |
L |
F |
L |
- |
G |
A |
Q |
N |
G |
E |
S |
G |
N |
R |
M |
Q |
L |
L |
S |
H |
H |
L |
S |
L |
P |
K |
S |
S |
S |
T |
A |
S |
D |
M |
V |
S |
V |
D |
K |
Y |
L |
Q |
L |
Q |
pt044243_POPTR_ |
S |
E |
N |
F |
S |
S |
M |
K |
R |
D |
Q |
E |
- |
N |
G |
N |
L |
F |
S |
N |
N |
A |
Q |
N |
G |
E |
L |
G |
N |
R |
T |
H |
V |
F |
A |
H |
H |
L |
S |
L |
P |
K |
- |
- |
- |
T |
S |
V |
E |
M |
V |
A |
M |
E |
K |
F |
L |
H |
L |
Q |
|
AT2G42280.1 |
D |
S |
V |
P |
C |
K |
I |
R |
A |
K |
R |
G |
C |
A |
T |
H |
P |
R |
S |
I |
A |
E |
R |
V |
R |
R |
T |
R |
I |
S |
E |
R |
M |
R |
K |
L |
Q |
E |
L |
V |
P |
N |
M |
D |
K |
Q |
T |
N |
T |
S |
D |
M |
L |
D |
L |
A |
V |
D |
Y |
I |
pt044243_POPTR_ |
D |
S |
V |
P |
C |
K |
I |
R |
A |
K |
R |
G |
C |
A |
T |
H |
P |
R |
S |
I |
A |
E |
R |
V |
R |
R |
T |
R |
I |
S |
E |
R |
M |
R |
K |
L |
Q |
E |
L |
V |
P |
N |
M |
D |
K |
Q |
T |
N |
T |
A |
D |
M |
L |
D |
L |
A |
V |
D |
Y |
I |
|
AT2G42280.1 |
K |
D |
L |
Q |
R |
Q |
Y |
K |
I |
L |
N |
D |
N |
R |
A |
N |
C |
K |
C |
M |
N |
K |
E |
K |
- |
- |
- |
- |
K |
S |
I |
pt044243_POPTR_ |
K |
D |
L |
Q |
K |
Q |
Y |
K |
T |
L |
S |
D |
N |
R |
A |
N |
C |
K |
C |
L |
S |
K |
Q |
K |
P |
V |
Q |
N |
K |
I |
V |
|
|