fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb016288 not found in 399aa AT2G42280.1 1st_1st 0.294117647 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G42280.1     MDSNNHLYDPNPTGSGLLRFRSAPSSVLAAFVDD----------DKIGFDSDRLLSRFVT
Sb016288_Sorbi1 -----------MTSSGLLRYRSAPSTVLGDLCEDLLPPAPGAGPPRDG--ADNVISRFLA
                            *.*****:*****:**. : :*           : *  :*.::***::

AT2G42280.1     S--NGVNGDLGSPKFEDKSPVSLTNTSVSYAATLPPPPQLEPSSF-----LGLPPHYPRQ
Sb016288_Sorbi1 DHHHHIRDDKPSP---------------------PPPPAAAPAHFPSAADMASQQHQHQQ
                .  : :..*  **                     ****   *: *     :.   *  :*

AT2G42280.1     -------------------------SKGIMNSVGLDQFLGINNHHTKPVESNLLRQSSSP
Sb016288_Sorbi1 MMFHSQSQQQHMVDANKPGGLYRTVSSGMEDAAGTGAGVGVG------AASNLIRQSSSP
                                         *.*: ::.* .  :*:.      . ***:******

AT2G42280.1     AGMFTNLSDQNGYGSMRNL---MNYEEDEESPSNSNG-------------------LRRH
Sb016288_Sorbi1 AGFLDHFSMDNGYGAMLRASMGMGFRDGSGGVGGAGGAATDSLAGGGGGGGSGSGRLKGQ
                **:: ::* :****:* .    *.:.:.. . ..:.*                   *: :

AT2G42280.1     CSLSSRPPSSLGMLSQIPEI--------APET----------NFPYSH--WNDPSSFI--
Sb016288_Sorbi1 LSFSSRQGS---LMSQISEMDSEEIGGSSPEAAAGGRGGYIPGYPMSSAGWDDSSSALMS
                 *:***  *   ::***.*:        :**:          .:* *   *:*.** :  

AT2G42280.1     DNLSSLKR---EAEDDGKLFLGAQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDKYLQL
Sb016288_Sorbi1 DSLSGMKRPRDSSEPGGQQQQQQQNGGGG-----LAHQFSLPK---TSSEMAAIEKFLQF
                *.**.:**   .:* .*:     *** .*     *:*::****   *:*:*.:::*:**:

AT2G42280.1     QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDY
Sb016288_Sorbi1 QDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDY
                **:*************************:****:**************************

AT2G42280.1     IKDLQRQYKILNDNRANCKCMNKEKKSI--
Sb016288_Sorbi1 IKDLQKQVKALNESRASCTCPASKHQQFSG
                *****:* * **:.**.*.*  .:::.:
BoxShade v3.31 C (beta, 970507) Output
AT2G42280.1     M D S N N H L Y D P N P T G S G L L R F R S A P S S V L A A F V D D - - - - - - - - - - D K I G F D S D R L L S R F V T
Sb016288_Sorbi1    - - - - - - - - - - - M T S S G L L R Y R S A P S T V L G D L C E D L L P P A P G A G P P R D G - - A D N V I S R F L A
 
AT2G42280.1     S - - N G V N G D L G S P K F E D K S P V S L T N T S V S Y A A T L P P P P Q L E P S S F - - - - - L G L P P H Y P R Q
Sb016288_Sorbi1    D H H H H I R D D K P S P - - - - - - - - - - - - - - - - - - - - - P P P P A A A P A H F P S A A D M A S Q Q H Q H Q Q
 
AT2G42280.1     - - - - - - - - - - - - - - - - - - - - - - - - - S K G I M N S V G L D Q F L G I N N H H T K P V E S N L L R Q S S S P
Sb016288_Sorbi1    M M F H S Q S Q Q Q H M V D A N K P G G L Y R T V S S G M E D A A G T G A G V G V G - - - - - - A A S N L I R Q S S S P
 
AT2G42280.1     A G M F T N L S D Q N G Y G S M R N L - - - M N Y E E D E E S P S N S N G - - - - - - - - - - - - - - - - - - - L R R H
Sb016288_Sorbi1    A G F L D H F S M D N G Y G A M L R A S M G M G F R D G S G G V G G A G G A A T D S L A G G G G G G G S G S G R L K G Q
 
AT2G42280.1     C S L S S R P P S S L G M L S Q I P E I - - - - - - - - A P E T - - - - - - - - - - N F P Y S H - - W N D P S S F I - -
Sb016288_Sorbi1    L S F S S R Q G S - - - L M S Q I S E M D S E E I G G S S P E A A A G G R G G Y I P G Y P M S S A G W D D S S S A L M S
 
AT2G42280.1     D N L S S L K R - - - E A E D D G K L F L G A Q N G E S G N R M Q L L S H H L S L P K S S S T A S D M V S V D K Y L Q L
Sb016288_Sorbi1    D S L S G M K R P R D S S E P G G Q Q Q Q Q Q Q N G G G G - - - - - L A H Q F S L P K - - - T S S E M A A I E K F L Q F
 
AT2G42280.1     Q D S V P C K I R A K R G C A T H P R S I A E R V R R T R I S E R M R K L Q E L V P N M D K Q T N T S D M L D L A V D Y
Sb016288_Sorbi1    Q D A V P C K I R A K R G C A T H P R S I A E R V R R T K I S E R I R K L Q E L V P N M D K Q T N T S D M L D L A V D Y
 
AT2G42280.1     I K D L Q R Q Y K I L N D N R A N C K C M N K E K K S I - -
Sb016288_Sorbi1    I K D L Q K Q V K A L N E S R A S C T C P A S K H Q Q F S G
 
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