fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42300.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006185 not found in 354aa AT3G57800.2 1st_not 0.418212478 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G42300.1     MDLTQGFRARSGVVGPVAGLESLNFSDEFRHLVTTMPPETTGGSFTALLEMPVTQAMELL
pt006185_POPTR_ MDLTTASGARSGPELDETGLDSFQLGEDIRHLITA--PSENASSFIALLELPANQAVELL
                **** .  ****     :**:*:::.:::***:*:  *. ...** ****:*..**:***

AT2G42300.1     HFPDSSSSQARTVTSGDISPTTLHPFGALTFPSNSLLLDRAARFSVIATEQNGNFSGETA
pt006185_POPTR_ H-SDSGQKQ----------------YPNLTFPSNT-----SAIFSVF----NGGSNSTDS
                * .**...*                :  ******:     :* ***:    **. ..  :

AT2G42300.1     NSLPSNPGA-NLDR---VKAEPAETDSMVENQNQSYS-------------SGKRKEREKK
pt006185_POPTR_ SPVPSNSSSKDLEKASAVKCEPLETGSYLDSSHPLVSDPTVDNSAPNARPSSKRKEREKK
                ..:***..: :*::   **.** **.* ::..:   *             *.********

AT2G42300.1     VKSSTKKNK---SSVESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPG
pt006185_POPTR_ VKAASKKSKTESSQQEEDMLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPG
                **:::**.*   *. *.* ***************.************* ***********

AT2G42300.1     CDKIQGTALVLDEIINHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILASENGSLMDGSF-
pt006185_POPTR_ CNKISGTALVLDEIINHVQSLQCQVEFLSMRLAAVNPRIDFNLDSMLAAESGSLIDSNFP
                *:**.**************:** ***:******************:**:*.***:*..* 

AT2G42300.1     ---------NAE---SYHQLQQ-WPFDGYHQPEWGREEDHHQANF------------SMG
pt006185_POPTR_ GMVMPLMWPEAEVNGNRHQFQQHWQFDALHQPIWGREEDSH--NFITPENSLLSYDSSAN
                         :**   . **:** * **. *** ****** *  **            * .

AT2G42300.1     SATLHPNQ------------VKMEL
pt006185_POPTR_ SGKKQKNERNQRPSLSHDVCLSYE-
                *.. : *:            :. *
BoxShade v3.31 C (beta, 970507) Output
AT2G42300.1     M D L T Q G F R A R S G V V G P V A G L E S L N F S D E F R H L V T T M P P E T T G G S F T A L L E M P V T Q A M E L L
pt006185_POPTR_    M D L T T A S G A R S G P E L D E T G L D S F Q L G E D I R H L I T A - - P S E N A S S F I A L L E L P A N Q A V E L L
 
AT2G42300.1     H F P D S S S S Q A R T V T S G D I S P T T L H P F G A L T F P S N S L L L D R A A R F S V I A T E Q N G N F S G E T A
pt006185_POPTR_    H - S D S G Q K Q - - - - - - - - - - - - - - - - Y P N L T F P S N T - - - - - S A I F S V F - - - - N G G S N S T D S
 
AT2G42300.1     N S L P S N P G A - N L D R - - - V K A E P A E T D S M V E N Q N Q S Y S - - - - - - - - - - - - - S G K R K E R E K K
pt006185_POPTR_    S P V P S N S S S K D L E K A S A V K C E P L E T G S Y L D S S H P L V S D P T V D N S A P N A R P S S K R K E R E K K
 
AT2G42300.1     V K S S T K K N K - - - S S V E S D K L P Y V H V R A R R G Q A T D N H S L A E R A R R E K I N A R M K L L Q E L V P G
pt006185_POPTR_    V K A A S K K S K T E S S Q Q E E D M L P Y V H V R A R R G Q A T D S H S L A E R A R R E K I N Q R M K L L Q E L V P G
 
AT2G42300.1     C D K I Q G T A L V L D E I I N H V Q T L Q R Q V E M L S M R L A A V N P R I D F N L D S I L A S E N G S L M D G S F -
pt006185_POPTR_    C N K I S G T A L V L D E I I N H V Q S L Q C Q V E F L S M R L A A V N P R I D F N L D S M L A A E S G S L I D S N F P
 
AT2G42300.1     - - - - - - - - - N A E - - - S Y H Q L Q Q - W P F D G Y H Q P E W G R E E D H H Q A N F - - - - - - - - - - - - S M G
pt006185_POPTR_    G M V M P L M W P E A E V N G N R H Q F Q Q H W Q F D A L H Q P I W G R E E D S H - - N F I T P E N S L L S Y D S S A N
 
AT2G42300.1     S A T L H P N Q - - - - - - - - - - - - V K M E L
pt006185_POPTR_    S G K K Q K N E R N Q R P S L S H D V C L S Y E -
 
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