Input
| Putative repression domain
|
|
AT2G42380.2 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt012497 |
not found in 308aa |
AT2G42380.2 |
1st_1st |
0.557114228 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT2G42380.2 MAQLPPKIPNMTQHWPDFSSQKLSPF-----STPTATAVATATTTVQNPSWVDEFLDFSA
pt012497_POPTR_ MAQLPPKIPNVTPSWPDFSHKKL-PITGIMETSPPRDDIITAIVT--NPSWVDEFLGFSS
**********:* ***** :** *: ::*. : ** .* *********.**:
AT2G42380.2 SRRGNHRRSISDSIAFL-EAPTVSIEDHQFDRFDDEQFMSMFTDDDNLHSNPSHINNKNN
pt012497_POPTR_ TRRGTHRRSVSDSIAFREEAPTISTD---FDKFDDEQLMSMFNDD------------ISN
:***.****:****** ****:* : **:*****:****.** .*
AT2G42380.2 NVGPTGSSSNTSTPS--NSFNDDNKEL-PPSDHNMNNNINNNYNDEVQSQCKMEPEDGTA
pt012497_POPTR_ AVAAPNSSSTPSSPSDHNSINDEKEAIVVASKHKQQQKVRNE-NDEGQSPSEWETPTTVP
*....***..*:** **:**::: : .*.*: ::::.*: *** ** .: *. ..
AT2G42380.2 SNNNSGDSSGNRILDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR
pt012497_POPTR_ TATDPAATSNERKIDPRRVKRILANRQSAQRSRVRKLQYISELERCVTSLQGEVSVLSPR
: .:.. :*.:* :**:****************************.*****.********
AT2G42380.2 VAFLDHQRLLLNVDNSALKQRIAALSQDKLFKDAHQEALKREIERLRQVYNQQSLTNVEN
pt012497_POPTR_ VAYLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNL-KMEN
**:**********************:***:********************:**.* ::**
AT2G42380.2 ANHLSATGAGATPAVD--IKSSVETEQLLNVS
pt012497_POPTR_ T---SPPSASSTPSNDPTTPTTDKEQQLFQV-
: *...*.:**: * :: : :**::*
BoxShade v3.31 C (beta, 970507) Output
AT2G42380.2 |
M |
A |
Q |
L |
P |
P |
K |
I |
P |
N |
M |
T |
Q |
H |
W |
P |
D |
F |
S |
S |
Q |
K |
L |
S |
P |
F |
- |
- |
- |
- |
- |
S |
T |
P |
T |
A |
T |
A |
V |
A |
T |
A |
T |
T |
T |
V |
Q |
N |
P |
S |
W |
V |
D |
E |
F |
L |
D |
F |
S |
A |
pt012497_POPTR_ |
M |
A |
Q |
L |
P |
P |
K |
I |
P |
N |
V |
T |
P |
S |
W |
P |
D |
F |
S |
H |
K |
K |
L |
- |
P |
I |
T |
G |
I |
M |
E |
T |
S |
P |
P |
R |
D |
D |
I |
I |
T |
A |
I |
V |
T |
- |
- |
N |
P |
S |
W |
V |
D |
E |
F |
L |
G |
F |
S |
S |
|
AT2G42380.2 |
S |
R |
R |
G |
N |
H |
R |
R |
S |
I |
S |
D |
S |
I |
A |
F |
L |
- |
E |
A |
P |
T |
V |
S |
I |
E |
D |
H |
Q |
F |
D |
R |
F |
D |
D |
E |
Q |
F |
M |
S |
M |
F |
T |
D |
D |
D |
N |
L |
H |
S |
N |
P |
S |
H |
I |
N |
N |
K |
N |
N |
pt012497_POPTR_ |
T |
R |
R |
G |
T |
H |
R |
R |
S |
V |
S |
D |
S |
I |
A |
F |
R |
E |
E |
A |
P |
T |
I |
S |
T |
D |
- |
- |
- |
F |
D |
K |
F |
D |
D |
E |
Q |
L |
M |
S |
M |
F |
N |
D |
D |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
I |
S |
N |
|
AT2G42380.2 |
N |
V |
G |
P |
T |
G |
S |
S |
S |
N |
T |
S |
T |
P |
S |
- |
- |
N |
S |
F |
N |
D |
D |
N |
K |
E |
L |
- |
P |
P |
S |
D |
H |
N |
M |
N |
N |
N |
I |
N |
N |
N |
Y |
N |
D |
E |
V |
Q |
S |
Q |
C |
K |
M |
E |
P |
E |
D |
G |
T |
A |
pt012497_POPTR_ |
A |
V |
A |
A |
P |
N |
S |
S |
S |
T |
P |
S |
S |
P |
S |
D |
H |
N |
S |
I |
N |
D |
E |
K |
E |
A |
I |
V |
V |
A |
S |
K |
H |
K |
Q |
Q |
Q |
K |
V |
R |
N |
E |
- |
N |
D |
E |
G |
Q |
S |
P |
S |
E |
W |
E |
T |
P |
T |
T |
V |
P |
|
AT2G42380.2 |
S |
N |
N |
N |
S |
G |
D |
S |
S |
G |
N |
R |
I |
L |
D |
P |
K |
R |
V |
K |
R |
I |
L |
A |
N |
R |
Q |
S |
A |
Q |
R |
S |
R |
V |
R |
K |
L |
Q |
Y |
I |
S |
E |
L |
E |
R |
S |
V |
T |
S |
L |
Q |
A |
E |
V |
S |
V |
L |
S |
P |
R |
pt012497_POPTR_ |
T |
A |
T |
D |
P |
A |
A |
T |
S |
N |
E |
R |
K |
I |
D |
P |
R |
R |
V |
K |
R |
I |
L |
A |
N |
R |
Q |
S |
A |
Q |
R |
S |
R |
V |
R |
K |
L |
Q |
Y |
I |
S |
E |
L |
E |
R |
C |
V |
T |
S |
L |
Q |
G |
E |
V |
S |
V |
L |
S |
P |
R |
|
AT2G42380.2 |
V |
A |
F |
L |
D |
H |
Q |
R |
L |
L |
L |
N |
V |
D |
N |
S |
A |
L |
K |
Q |
R |
I |
A |
A |
L |
S |
Q |
D |
K |
L |
F |
K |
D |
A |
H |
Q |
E |
A |
L |
K |
R |
E |
I |
E |
R |
L |
R |
Q |
V |
Y |
N |
Q |
Q |
S |
L |
T |
N |
V |
E |
N |
pt012497_POPTR_ |
V |
A |
Y |
L |
D |
H |
Q |
R |
L |
L |
L |
N |
V |
D |
N |
S |
A |
L |
K |
Q |
R |
I |
A |
A |
L |
A |
Q |
D |
K |
I |
F |
K |
D |
A |
H |
Q |
E |
A |
L |
K |
R |
E |
I |
E |
R |
L |
R |
Q |
V |
Y |
H |
Q |
Q |
N |
L |
- |
K |
M |
E |
N |
|
AT2G42380.2 |
A |
N |
H |
L |
S |
A |
T |
G |
A |
G |
A |
T |
P |
A |
V |
D |
- |
- |
I |
K |
S |
S |
V |
E |
T |
E |
Q |
L |
L |
N |
V |
S |
pt012497_POPTR_ |
T |
- |
- |
- |
S |
P |
P |
S |
A |
S |
S |
T |
P |
S |
N |
D |
P |
T |
T |
P |
T |
T |
D |
K |
E |
Q |
Q |
L |
F |
Q |
V |
- |
|
|