fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42380.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os003920 not found in 265aa AT3G58120.1 1st_not 0.426853707 II
Os000963 not found in 330aa AT3G58120.1 not_not 0.424849699 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G42380.2     MAQLPPKIPNMTQHWPDFS-----------------------SQKLSPFS-TPTATAVAT
Os000963_Os01t0 MAQLPPKIPTMATAWPEFGGGHHHHAAHGHHHQRSPSMGAFLAAPLPPFPLPPPAPANGG
Os003920_Os01t0 MAQLPPKIPVAAP-------GHHQHWA-----------------------------SAGG
                *********  :                                            : . 

AT2G42380.2     ATTTVQ----NPSWVDEFLDFSASRRGNHRRSISDSIAFLE---APTVSIEDHQFDRFDD
Os000963_Os01t0 AQQQQQQQQHQPSWVDEFLDFSATKRGAHRRSVSDSVAFLDPVSDDNAGVGAHDFDRLDD
Os003920_Os01t0 AGDA--------AWADEFAEFAASRRGAHRRSLSDSVAFVE-VAPAGCGAGG-EFDRLDD
                *           :*.*** :*:*::** ****:***:**::       .    :***:**

AT2G42380.2     EQFMSMFTDDDNLHSNPSHINNKNNNVGPTGSSSNTSTPSNSFNDDNKELPPSDHNMNNN
Os000963_Os01t0 DQLMSMFSDD--LQPPPP----QQQPAAPAASASS----------------PSDHNSMND
Os003920_Os01t0 DQLMSMFPDE--------------------GGSSA----------------PGSDNGGSD
                :*:****.*:                    ..:*                 *...*  .:

AT2G42380.2     INNN-------YNDEVQSQCKMEPEDGTASNNNSGDSSGNRILDPKRVKRILANRQSAQR
Os000963_Os01t0 -----EKQDKGETDEAQSEC-----DGATPGQPA--SPATV--DPKRVKRILANRQSAQR
Os003920_Os01t0 SDGGGDKHAAAQSDDGQHAA-----GEPTQEQAAATSPTELIRDPKRVKRILANRQSAQR
                            .*: *  .     . .:  : :  *.     *****************

AT2G42380.2     SRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALSQDKLF
Os000963_Os01t0 SRVRKLQYISELERSVTSLQTEVSALSPRVAFLDHQRSLLTLGNSHLKQRIAALAQDKIF
Os003920_Os01t0 SRVRKLQYISELERSVTTLQNEVSVLSPRVAFLDQQRTILTVGNSHLKQRIAALAQDKIF
                *****************:** ***.*********:** :*.:.** ********:***:*

AT2G42380.2     KD-AHQEALKREIERLRQVYNQQS--LTNVENANHLSATGAGATPA--------VDIKSS
Os000963_Os01t0 KDGGTEEGDREAAANLPPAKPQERGIPTGGRGP--------GPRPRQCRPDRQRGGRRGR
Os003920_Os01t0 KD-AHQEALRKEIERLRQVYQQQNTKLSGGLAADH-AHVHGGPPPV-------------R
                ** . :*. :.   .*  .  *:    :.   .        *. *               

AT2G42380.2     VETEQLLNVS----
Os000963_Os01t0 AMPALVIGRDPDAL
Os003920_Os01t0 AEKELMS-------
                .    :
BoxShade v3.31 C (beta, 970507) Output
AT2G42380.2     M A Q L P P K I P N M T Q H W P D F S - - - - - - - - - - - - - - - - - - - - - - - S Q K L S P F S - T P T A T A V A T
Os000963_Os01t0    M A Q L P P K I P T M A T A W P E F G G G H H H H A A H G H H H Q R S P S M G A F L A A P L P P F P L P P P A P A N G G
Os003920_Os01t0    M A Q L P P K I P V A A P - - - - - - - G H H Q H W A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S A G G
 
AT2G42380.2     A T T T V Q - - - - N P S W V D E F L D F S A S R R G N H R R S I S D S I A F L E - - - A P T V S I E D H Q F D R F D D
Os000963_Os01t0    A Q Q Q Q Q Q Q Q H Q P S W V D E F L D F S A T K R G A H R R S V S D S V A F L D P V S D D N A G V G A H D F D R L D D
Os003920_Os01t0    A G D A - - - - - - - - A W A D E F A E F A A S R R G A H R R S L S D S V A F V E - V A P A G C G A G G - E F D R L D D
 
AT2G42380.2     E Q F M S M F T D D D N L H S N P S H I N N K N N N V G P T G S S S N T S T P S N S F N D D N K E L P P S D H N M N N N
Os000963_Os01t0    D Q L M S M F S D D - - L Q P P P P - - - - Q Q Q P A A P A A S A S S - - - - - - - - - - - - - - - - P S D H N S M N D
Os003920_Os01t0    D Q L M S M F P D E - - - - - - - - - - - - - - - - - - - - G G S S A - - - - - - - - - - - - - - - - P G S D N G G S D
 
AT2G42380.2     I N N N - - - - - - - Y N D E V Q S Q C K M E P E D G T A S N N N S G D S S G N R I L D P K R V K R I L A N R Q S A Q R
Os000963_Os01t0    - - - - - E K Q D K G E T D E A Q S E C - - - - - D G A T P G Q P A - - S P A T V - - D P K R V K R I L A N R Q S A Q R
Os003920_Os01t0    S D G G G D K H A A A Q S D D G Q H A A - - - - - G E P T Q E Q A A A T S P T E L I R D P K R V K R I L A N R Q S A Q R
 
AT2G42380.2     S R V R K L Q Y I S E L E R S V T S L Q A E V S V L S P R V A F L D H Q R L L L N V D N S A L K Q R I A A L S Q D K L F
Os000963_Os01t0    S R V R K L Q Y I S E L E R S V T S L Q T E V S A L S P R V A F L D H Q R S L L T L G N S H L K Q R I A A L A Q D K I F
Os003920_Os01t0    S R V R K L Q Y I S E L E R S V T T L Q N E V S V L S P R V A F L D Q Q R T I L T V G N S H L K Q R I A A L A Q D K I F
 
AT2G42380.2     K D - A H Q E A L K R E I E R L R Q V Y N Q Q S - - L T N V E N A N H L S A T G A G A T P A - - - - - - - - V D I K S S
Os000963_Os01t0    K D G G T E E G D R E A A A N L P P A K P Q E R G I P T G G R G P - - - - - - - - G P R P R Q C R P D R Q R G G R R G R
Os003920_Os01t0    K D - A H Q E A L R K E I E R L R Q V Y Q Q Q N T K L S G G L A A D H - A H V H G G P P P V - - - - - - - - - - - - - R
 
AT2G42380.2     V E T E Q L L N V S - - - -
Os000963_Os01t0    A M P A L V I G R D P D A L
Os003920_Os01t0    A E K E L M S - - - - - - -
 
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