fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42380.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027055 not found in 464aa AT3G58120.1 not_not 0.402805611 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G42380.2     ------------------------MAQLPPKIPNM--TQHWPDFSSQKLSPFSTPTATAV
Sb027055_Sorbi1 PLARAAAVQGVSGGAKKISSRTEAMAQLPPRAPSALPQDHW-----------------SA
                                        ******: *.    :**                 :.

AT2G42380.2     ATATTTVQNPSWVDEFLDFSASRRGNHRRSISDSIAFLEAPTVSIED-----------HQ
Sb027055_Sorbi1 AGA-----------EFLGFAAARRGAHRRSASDSAAFLE--VVPMDDVIGGGGSGSAGDD
                * *           ***.*:*:*** **** *** ****  .*.::*           .:

AT2G42380.2     FDRFDDEQFMSMFTDDDNLHSNPSHINNKNNNVGPTGSSSNTSTPSNSFNDDNKELPPSD
Sb027055_Sorbi1 FDRLDDEQLMSMFSDVD--------------------------APA--------------
                ***:****:****:* *                          :*:              

AT2G42380.2     HNMNNNINNNYNDEVQSQCKMEPEDGTASNNNSG-DSSGNRILDPKRVKRILANRQSAQR
Sb027055_Sorbi1 --VSDGAGERAGDAAQLMDVGDAEDGMAASSPAGARAAADGVADPKRVKRILANRQSAQR
                  :.:. .:. .* .*     :.*** *:.. :*  ::.: : *****************

AT2G42380.2     SRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALSQDKLF
Sb027055_Sorbi1 SRVRKLQYISELERSVTSLQMEVSALSPRVAFLDHQRSLLTVGNSHLKQRIAALAQDKIF
                ******************** ***.************ **.*.** ********:***:*

AT2G42380.2     KDAHQEALKREIERLRQVYNQQSLTNVENANHLSATGAGATPAVDIKSSVETEQLLNVS-
Sb027055_Sorbi1 KDAHQEALKKEIERLRQVYQQQQIK--------VATTGGADIAA--AASMQARQELLACE
                *********:*********:**.:.         ** .**  *.   :*:::.* * .. 

AT2G42380.2     -----
Sb027055_Sorbi1 GAAIR
BoxShade v3.31 C (beta, 970507) Output
AT2G42380.2     - - - - - - - - - - - - - - - - - - - - - - - - M A Q L P P K I P N M - - T Q H W P D F S S Q K L S P F S T P T A T A V
Sb027055_Sorbi1    P L A R A A A V Q G V S G G A K K I S S R T E A M A Q L P P R A P S A L P Q D H W - - - - - - - - - - - - - - - - - S A
 
AT2G42380.2     A T A T T T V Q N P S W V D E F L D F S A S R R G N H R R S I S D S I A F L E A P T V S I E D - - - - - - - - - - - H Q
Sb027055_Sorbi1    A G A - - - - - - - - - - - E F L G F A A A R R G A H R R S A S D S A A F L E - - V V P M D D V I G G G G S G S A G D D
 
AT2G42380.2     F D R F D D E Q F M S M F T D D D N L H S N P S H I N N K N N N V G P T G S S S N T S T P S N S F N D D N K E L P P S D
Sb027055_Sorbi1    F D R L D D E Q L M S M F S D V D - - - - - - - - - - - - - - - - - - - - - - - - - - A P A - - - - - - - - - - - - - -
 
AT2G42380.2     H N M N N N I N N N Y N D E V Q S Q C K M E P E D G T A S N N N S G - D S S G N R I L D P K R V K R I L A N R Q S A Q R
Sb027055_Sorbi1    - - V S D G A G E R A G D A A Q L M D V G D A E D G M A A S S P A G A R A A A D G V A D P K R V K R I L A N R Q S A Q R
 
AT2G42380.2     S R V R K L Q Y I S E L E R S V T S L Q A E V S V L S P R V A F L D H Q R L L L N V D N S A L K Q R I A A L S Q D K L F
Sb027055_Sorbi1    S R V R K L Q Y I S E L E R S V T S L Q M E V S A L S P R V A F L D H Q R S L L T V G N S H L K Q R I A A L A Q D K I F
 
AT2G42380.2     K D A H Q E A L K R E I E R L R Q V Y N Q Q S L T N V E N A N H L S A T G A G A T P A V D I K S S V E T E Q L L N V S -
Sb027055_Sorbi1    K D A H Q E A L K K E I E R L R Q V Y Q Q Q Q I K - - - - - - - - V A T T G G A D I A A - - A A S M Q A R Q E L L A C E
 
AT2G42380.2     - - - - -
Sb027055_Sorbi1    G A A I R
 
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