fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm036318 ACALYRLELKLVDGKK in 384/478 AT1G28520.2 1st_not 0.418803418 II
Pt014162 LCALYRLELKLANGKR in 385/438 AT1G28520.2 1st_not 0.491452991 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G42400.1     MSNHPK---ITSAHQ----NVEEKLRELQERFCHLQAARKEGRHGDLALLEAQISQNIRE
pt014162_POPTR_ MQKGKKSKCTSVSHHLLMDNAKTRLNDLHERFSNLQAARKEGWNSDVAVLEEQVYQGLRE
gm036318_Glyma1 MKKVPKNSCKSASHRLFKDKAKNRVDDLQLMFLDLQFARKESRTVDAAVLEEQVHQMLRE
                *.:  *    : :*:    :.: :: :*:  * .** ****.   * *:** *: * :**

AT2G42400.1     WQAELTAPSPESSLLG-EGISQFLEEFAPLLKL-DEEDDATSTLKEHAGAKP--DPEGFS
pt014162_POPTR_ WKAELDVPSPANSLLD-ISLGSFSDDIGRLLQLYEEEDDATSPLTMQSVLKPEMQPEPNF
gm036318_Glyma1 WKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDASSQLAAP-------KPEPND
                *:***  *** .**    .:..*  ::  **:* :*****:* *          .**   

AT2G42400.1     QSLCPPEWTSENFSQSPFNGNFSCGFEDALNSTETHGQQLHYGYEGFDPSINSAPDFHDQ
pt014162_POPTR_ QNLNPGNLTT--FQHGLGFQGF-----HQPNSSASGLQNV----------VVSAPDITTL
gm036318_Glyma1 QTLQVGGKVM--FQEGQQQHDFP--FVDECKHFTSSVQNV----------AANNPDGHD-
                *.*     .   *...    .*     .  :   :  *::            . **    

AT2G42400.1     KLSSNLDITSQYDYIFSEVRQELDNSPSTKLDSSEEIDNFA---EFSTPSSVRVPPSAFL
pt014162_POPTR_ -----LD-CQQFT-----LDEEFDPGLFGGTNDIEECGKNA---ESNNLQYISPPPSAFM
gm036318_Glyma1 -----LE-YHQFD-----LHQDYDHGFYTGFNGTGYCEEDAIPHISSYLPSICPPPSAFL
                     *:   *:      : :: * .     :.     : *     .    :  *****:

AT2G42400.1     GPKCALWDCTRPAQGSEWYLDYCSNYHGTLALNEDSPGTAPVLRPGGISLKDNLLIDALR
pt014162_POPTR_ GPKCALWDCTRPAQVAEWLEDYCSSFHATLALNEGPPGMAPVLRPRGINLKDNLLFDALI
gm036318_Glyma1 GPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALS
                *********.****  :*  ****.:*.:*****..** ****** **.******: ** 

AT2G42400.1     AKTQGKNVGIPVCEGAVNTKCPWNAAELFHLELVEGETIREWLFFDKPRRAYDSGNRKQR
pt014162_POPTR_ AKMQGKNVGIPQCEGAAVMKSPWNAAELFDLSLLDGETIREWLFFDKPRRAFDSGNRKQR
gm036318_Glyma1 AKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQR
                ** ***:**** ****.  *.****.***.*.:::****************::*******

AT2G42400.1     SLPDYSGRGWHESRKQLMKEQEGQKRSYYMDPQPPGPFEWHLFEYQINESDACALYRLEL
pt014162_POPTR_ SLPDYNGRGWHESRKQVMKELGGQKKSYYMDPQPPGCHEWHLFEYEINKCDLCALYRLEL
gm036318_Glyma1 SLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLEL
                *****.**********:*:*  * *:******** . .****:**:*.:.* ********

AT2G42400.1     KVGNGKKSPKGKISKDPLADLQKKMGQFK--VASDKPSPPTKGRKE--------------
pt014162_POPTR_ KLANGKRSPKGKVSKDPLADLQKKMGRLTAVVTADN-GPPLKGKTKADREN---------
gm036318_Glyma1 KLVDGKKNSKTKAANDSVADLQKQMGRLSAEFPHDN-KRAAKGRAKINTKVGIGGGVYSA
                *: :**:..* * ::*.:*****:**::.  .. *:   . **: :              

AT2G42400.1     --------------------------------
pt014162_POPTR_ --------------------------------
gm036318_Glyma1 SHRVTPLNGTYEYGLAAPYDYLVDNMGDYYGT
BoxShade v3.31 C (beta, 970507) Output
AT2G42400.1     M S N H P K - - - I T S A H Q - - - - N V E E K L R E L Q E R F C H L Q A A R K E G R H G D L A L L E A Q I S Q N I R E
pt014162_POPTR_    M Q K G K K S K C T S V S H H L L M D N A K T R L N D L H E R F S N L Q A A R K E G W N S D V A V L E E Q V Y Q G L R E
gm036318_Glyma1    M K K V P K N S C K S A S H R L F K D K A K N R V D D L Q L M F L D L Q F A R K E S R T V D A A V L E E Q V H Q M L R E
 
AT2G42400.1     W Q A E L T A P S P E S S L L G - E G I S Q F L E E F A P L L K L - D E E D D A T S T L K E H A G A K P - - D P E G F S
pt014162_POPTR_    W K A E L D V P S P A N S L L D - I S L G S F S D D I G R L L Q L Y E E E D D A T S P L T M Q S V L K P E M Q P E P N F
gm036318_Glyma1    W K A E L N E P S P A S S L Q Q G G S L G S F S T D I C R L L Q L C E E E D D A S S Q L A A P - - - - - - - K P E P N D
 
AT2G42400.1     Q S L C P P E W T S E N F S Q S P F N G N F S C G F E D A L N S T E T H G Q Q L H Y G Y E G F D P S I N S A P D F H D Q
pt014162_POPTR_    Q N L N P G N L T T - - F Q H G L G F Q G F - - - - - H Q P N S S A S G L Q N V - - - - - - - - - - V V S A P D I T T L
gm036318_Glyma1    Q T L Q V G G K V M - - F Q E G Q Q Q H D F P - - F V D E C K H F T S S V Q N V - - - - - - - - - - A A N N P D G H D -
 
AT2G42400.1     K L S S N L D I T S Q Y D Y I F S E V R Q E L D N S P S T K L D S S E E I D N F A - - - E F S T P S S V R V P P S A F L
pt014162_POPTR_    - - - - - L D - C Q Q F T - - - - - L D E E F D P G L F G G T N D I E E C G K N A - - - E S N N L Q Y I S P P P S A F M
gm036318_Glyma1    - - - - - L E - Y H Q F D - - - - - L H Q D Y D H G F Y T G F N G T G Y C E E D A I P H I S S Y L P S I C P P P S A F L
 
AT2G42400.1     G P K C A L W D C T R P A Q G S E W Y L D Y C S N Y H G T L A L N E D S P G T A P V L R P G G I S L K D N L L I D A L R
pt014162_POPTR_    G P K C A L W D C T R P A Q V A E W L E D Y C S S F H A T L A L N E G P P G M A P V L R P R G I N L K D N L L F D A L I
gm036318_Glyma1    G P K C A L W D C P R P A Q G L D W C Q D Y C S S F H A A L A L N E G P P G M A P V L R P G G I G L K D N L L F A A L S
 
AT2G42400.1     A K T Q G K N V G I P V C E G A V N T K C P W N A A E L F H L E L V E G E T I R E W L F F D K P R R A Y D S G N R K Q R
pt014162_POPTR_    A K M Q G K N V G I P Q C E G A A V M K S P W N A A E L F D L S L L D G E T I R E W L F F D K P R R A F D S G N R K Q R
gm036318_Glyma1    A K A Q G K D V G I P E C E G A A T A K S P W N A P E L F D L S V L E G E T I R E W L F F D K P R R A F E S G N R K Q R
 
AT2G42400.1     S L P D Y S G R G W H E S R K Q L M K E Q E G Q K R S Y Y M D P Q P P G P F E W H L F E Y Q I N E S D A C A L Y R L E L
pt014162_POPTR_    S L P D Y N G R G W H E S R K Q V M K E L G G Q K K S Y Y M D P Q P P G C H E W H L F E Y E I N K C D L C A L Y R L E L
gm036318_Glyma1    S L P D Y S G R G W H E S R K Q V M N E F G G L K R S Y Y M D P Q P L N H F E W H L Y E Y E I S K C D A C A L Y R L E L
 
AT2G42400.1     K V G N G K K S P K G K I S K D P L A D L Q K K M G Q F K - - V A S D K P S P P T K G R K E - - - - - - - - - - - - - -
pt014162_POPTR_    K L A N G K R S P K G K V S K D P L A D L Q K K M G R L T A V V T A D N - G P P L K G K T K A D R E N - - - - - - - - -
gm036318_Glyma1    K L V D G K K N S K T K A A N D S V A D L Q K Q M G R L S A E F P H D N - K R A A K G R A K I N T K V G I G G G V Y S A
 
AT2G42400.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt014162_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm036318_Glyma1    S H R V T P L N G T Y E Y G L A A P Y D Y L V D N M G D Y Y G T
 
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