fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014162 LCALYRLELKLANGKR in 385/438 AT1G28520.2 1st_not 0.491452991 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G42400.1     --MSNHPKITS-AHQ----NVEEKLRELQERFCHLQAARKEGRHGDLALLEAQISQNIRE
pt014162_POPTR_ MQKGKKSKCTSVSHHLLMDNAKTRLNDLHERFSNLQAARKEGWNSDVAVLEEQVYQGLRE
                   .::.* ** :*:    *.: :*.:*:***.:******** :.*:*:** *: *.:**

AT2G42400.1     WQAELTAPSPESSLLGEGISQFLEEFAPLLKL-DEEDDATSTLKEHAGAKPD--PEGFSQ
pt014162_POPTR_ WKAELDVPSPANSLLDISLGSFSDDIGRLLQLYEEEDDATSPLTMQSVLKPEMQPEPNFQ
                *:*** .*** .***. .:..* :::. **:* :*******.*. ::  **:  **   *

AT2G42400.1     SLCPPEWTSENFSQSPFNGNFSCGFEDALNSTETHGQQLHYGYEGFDPSINSAPDFHDQK
pt014162_POPTR_ NLNP--------------GNL---------TTFQHG----LGFQGFHQPNSSASGLQNVV
                .* *              **:         :*  **     *::**. . .**..:::  

AT2G42400.1     LSSNLDITSQYDYIFSEVRQELDNSPSTKLDSSEEIDNFAEFSTPSSVRVPPSAFLGPKC
pt014162_POPTR_ VSAP-DITTLLDCQQFTLDEEFDPGLFGGTNDIEECGKNAESNNLQYISPPPSAFMGPKC
                :*:  ***:  *     : :*:* .     :. ** .: ** .. . :  *****:****

AT2G42400.1     ALWDCTRPAQGSEWYLDYCSNYHGTLALNEDSPGTAPVLRPGGISLKDNLLIDALRAKTQ
pt014162_POPTR_ ALWDCTRPAQVAEWLEDYCSSFHATLALNEGPPGMAPVLRPRGINLKDNLLFDALIAKMQ
                ********** :**  ****.:*.******..** ****** **.******:*** ** *

AT2G42400.1     GKNVGIPVCEGAVNTKCPWNAAELFHLELVEGETIREWLFFDKPRRAYDSGNRKQRSLPD
pt014162_POPTR_ GKNVGIPQCEGAAVMKSPWNAAELFDLSLLDGETIREWLFFDKPRRAFDSGNRKQRSLPD
                ******* ****.  *.********.*.*::****************:************

AT2G42400.1     YSGRGWHESRKQLMKEQEGQKRSYYMDPQPPGPFEWHLFEYQINESDACALYRLELKVGN
pt014162_POPTR_ YNGRGWHESRKQVMKELGGQKKSYYMDPQPPGCHEWHLFEYEINKCDLCALYRLELKLAN
                *.**********:***  ***:********** .*******:**:.* *********:.*

AT2G42400.1     GKKSPKGKISKDPLADLQKKMGQFK-VASDKPSPPTKGRKE-----
pt014162_POPTR_ GKRSPKGKVSKDPLADLQKKMGRLTAVVTADNGPPLKGKTKADREN
                **:*****:*************::. *.: . .** **:.:
BoxShade v3.31 C (beta, 970507) Output
AT2G42400.1     - - M S N H P K I T S - A H Q - - - - N V E E K L R E L Q E R F C H L Q A A R K E G R H G D L A L L E A Q I S Q N I R E
pt014162_POPTR_    M Q K G K K S K C T S V S H H L L M D N A K T R L N D L H E R F S N L Q A A R K E G W N S D V A V L E E Q V Y Q G L R E
 
AT2G42400.1     W Q A E L T A P S P E S S L L G E G I S Q F L E E F A P L L K L - D E E D D A T S T L K E H A G A K P D - - P E G F S Q
pt014162_POPTR_    W K A E L D V P S P A N S L L D I S L G S F S D D I G R L L Q L Y E E E D D A T S P L T M Q S V L K P E M Q P E P N F Q
 
AT2G42400.1     S L C P P E W T S E N F S Q S P F N G N F S C G F E D A L N S T E T H G Q Q L H Y G Y E G F D P S I N S A P D F H D Q K
pt014162_POPTR_    N L N P - - - - - - - - - - - - - - G N L - - - - - - - - - T T F Q H G - - - - L G F Q G F H Q P N S S A S G L Q N V V
 
AT2G42400.1     L S S N L D I T S Q Y D Y I F S E V R Q E L D N S P S T K L D S S E E I D N F A E F S T P S S V R V P P S A F L G P K C
pt014162_POPTR_    V S A P - D I T T L L D C Q Q F T L D E E F D P G L F G G T N D I E E C G K N A E S N N L Q Y I S P P P S A F M G P K C
 
AT2G42400.1     A L W D C T R P A Q G S E W Y L D Y C S N Y H G T L A L N E D S P G T A P V L R P G G I S L K D N L L I D A L R A K T Q
pt014162_POPTR_    A L W D C T R P A Q V A E W L E D Y C S S F H A T L A L N E G P P G M A P V L R P R G I N L K D N L L F D A L I A K M Q
 
AT2G42400.1     G K N V G I P V C E G A V N T K C P W N A A E L F H L E L V E G E T I R E W L F F D K P R R A Y D S G N R K Q R S L P D
pt014162_POPTR_    G K N V G I P Q C E G A A V M K S P W N A A E L F D L S L L D G E T I R E W L F F D K P R R A F D S G N R K Q R S L P D
 
AT2G42400.1     Y S G R G W H E S R K Q L M K E Q E G Q K R S Y Y M D P Q P P G P F E W H L F E Y Q I N E S D A C A L Y R L E L K V G N
pt014162_POPTR_    Y N G R G W H E S R K Q V M K E L G G Q K K S Y Y M D P Q P P G C H E W H L F E Y E I N K C D L C A L Y R L E L K L A N
 
AT2G42400.1     G K K S P K G K I S K D P L A D L Q K K M G Q F K - V A S D K P S P P T K G R K E - - - - -
pt014162_POPTR_    G K R S P K G K V S K D P L A D L Q K K M G R L T A V V T A D N G P P L K G K T K A D R E N
 
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