fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42410.1 PNQVLDLELRLGYL at 205/214 in AT2G42410.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000211 PKEVLDLELRLGLLV in 187/196 AT2G42410.1 1st_1st 0.275 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G42410.1     -MKRTHLASFSNRDKTQEEEGEDGNGDNRVIMNHYKNYEAGLIPWPPKNYTCSFCRREFR
pt000211_POPTR_ MVKKFPQGSSTVKDKWEK---------NNAI---FQGEHSSVFSWPQRNYSCSFCKRQFI
                 :*:   .* : :** ::         *..*   ::. .:.::.** :**:****:*:* 

AT2G42410.1     SAQALGGHMNVHRRDRAKLRQIPSWLFE-PHHHTPIANPNPNFSSSSSSSTTTAHLEPSL
pt000211_POPTR_ SAQALGGHMNVHRRDRAKLRQLPSWFFKCPKY--PTTNPNPDHLLSSS------------
                *********************:***:*: *::  * :****:.  ***            

AT2G42410.1     TNQRSKTTPFPSARFDLLDSTTSYGGLMMDREKNKSNVCSREIKKSAIDACHSVRCEISR
pt000211_POPTR_ ----SKFLPYPD------DHTHDHSPYL----SSFSSPCCRE-KKSIVE-CHESK-----
                    **  *:*.      * * .:.  :    .. *. *.** *** :: **. :     

AT2G42410.1     GDLMNKKD---------------------------DQVMGLELGMSLRNPNQVLDLELRL
pt000211_POPTR_ -DLTKKKNNAGAVFGVGELKKNFAQECDQLEVLRRNEIINLDMEMGCEDPKEVLDLELRL
                 ** :**:                           ::::.*:: *. .:*::********

AT2G42410.1     GYL-
pt000211_POPTR_ GLLV
                * *
BoxShade v3.31 C (beta, 970507) Output
AT2G42410.1     - M K R T H L A S F S N R D K T Q E E E G E D G N G D N R V I M N H Y K N Y E A G L I P W P P K N Y T C S F C R R E F R
pt000211_POPTR_    M V K K F P Q G S S T V K D K W E K - - - - - - - - - N N A I - - - F Q G E H S S V F S W P Q R N Y S C S F C K R Q F I
 
AT2G42410.1     S A Q A L G G H M N V H R R D R A K L R Q I P S W L F E - P H H H T P I A N P N P N F S S S S S S S T T T A H L E P S L
pt000211_POPTR_    S A Q A L G G H M N V H R R D R A K L R Q L P S W F F K C P K Y - - P T T N P N P D H L L S S S - - - - - - - - - - - -
 
AT2G42410.1     T N Q R S K T T P F P S A R F D L L D S T T S Y G G L M M D R E K N K S N V C S R E I K K S A I D A C H S V R C E I S R
pt000211_POPTR_    - - - - S K F L P Y P D - - - - - - D H T H D H S P Y L - - - - S S F S S P C C R E - K K S I V E - C H E S K - - - - -
 
AT2G42410.1     G D L M N K K D - - - - - - - - - - - - - - - - - - - - - - - - - - - D Q V M G L E L G M S L R N P N Q V L D L E L R L
pt000211_POPTR_    - D L T K K K N N A G A V F G V G E L K K N F A Q E C D Q L E V L R R N E I I N L D M E M G C E D P K E V L D L E L R L
 
AT2G42410.1     G Y L -
pt000211_POPTR_    G L L V
 
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