fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42430.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm007212 not found in 213aa AT2G42430.1 not_1st 0.447136563 II
Gm026683 not found in 208aa AT2G42430.1 not_1st 0.405286343 II
Pt040295 not found in 213aa AT2G42430.1 not_1st 0.444933920 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G42430.1     MASS-GNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSK
gm026683_Glyma1 MASATGSGSSSGFGSPCGACKFLRRKCVTDCIFAPYFCSEQGAAKFAAIHKVFGASNVSK
pt040295_POPTR_ MASS-----VTGTGSPCGACKFLRRKCASDCIFAPYFCSEQGTARFAAIHKVFGASNVSK
gm007212_Glyma0 MASASGNGVSNGSGSPCGACKFLRRRCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSK
                ***:       * ************:*.:********.****.*:***************

AT2G42430.1     LLLNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGH
gm026683_Glyma1 LLLRIPAHGRFEAILTIAYEAQARLRDPVYGCVSHIFALQQ-----QAQVMQMKAQLDQN
pt040295_POPTR_ LLLHVPVADRYEAVVTIAYEAQARIRDPVYGCVAHIFSLQQQVACLQAQLMQVKAQLAQN
gm007212_Glyma0 LLLHIPAHDRCEAVVTITYEAQARIRDPVYGCVSHIFALQQQVARLQAQLMQVKAQLTQN
                ***.:*  .* **::**:******::*******:***:***     *:*:**:***:  :

AT2G42430.1     QTSAAGDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLE
gm026683_Glyma1 HMEPR-----NFEN-----HWSENVAQ--S---FNPF-----CPTSMNN--LISPQSSLD
pt040295_POPTR_ LIDSTR---INIENTHH--QWQGNNIS--G-VSSFPS-----YQTYINP---ISPQSSLD
gm007212_Glyma0 LVESR-----NIENNHH-LQGNNNNVT--GQLMNHPF-----CPTYMNP---ISPQSSLE
                  ..      . *.       . .     .     *          :*    :******:

AT2G42430.1     E---SFSNTSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNK-KRSVSYCSSDLGEL
gm026683_Glyma1 SLG--YSSINDG-MSMLDVQSSREE-----------YFALQACNSKKR--SY-NNDLGEL
pt040295_POPTR_ SVDLNNSNIDHGMMDMQDIKSGEE-------------FAFQSCAKVKR--PY-NSDLGEL
gm007212_Glyma0 SID--HSSINDG-MSMQDIQSRED-------------FQIQ--AK-ER--PYNNNDLGEL
                .     *. . .     :::. ..             *      . :*  .* ..*****

AT2G42430.1     QALALRMMKN--
gm026683_Glyma1 QELALRMIRNCD
pt040295_POPTR_ QALALRMMRN--
gm007212_Glyma0 QELALRMMRN--
                * *****::*
BoxShade v3.31 C (beta, 970507) Output
AT2G42430.1     M A S S - G N G T T A G T G S P C G A C K F L R R K C A S D C I F A P Y F S S E Q G A A R F A A I H K V F G A S N V S K
gm026683_Glyma1    M A S A T G S G S S S G F G S P C G A C K F L R R K C V T D C I F A P Y F C S E Q G A A K F A A I H K V F G A S N V S K
pt040295_POPTR_    M A S S - - - - - V T G T G S P C G A C K F L R R K C A S D C I F A P Y F C S E Q G T A R F A A I H K V F G A S N V S K
gm007212_Glyma0    M A S A S G N G V S N G S G S P C G A C K F L R R R C A S D C I F A P Y F C S E Q G P A R F A A I H K V F G A S N V S K
 
AT2G42430.1     L L L N V P I H D R C E A V V T I A Y E A Q A R L H D P V Y G C V S H I F A L Q Q Q V A F L Q S Q V M Q M K A Q I A G H
gm026683_Glyma1    L L L R I P A H G R F E A I L T I A Y E A Q A R L R D P V Y G C V S H I F A L Q Q - - - - - Q A Q V M Q M K A Q L D Q N
pt040295_POPTR_    L L L H V P V A D R Y E A V V T I A Y E A Q A R I R D P V Y G C V A H I F S L Q Q Q V A C L Q A Q L M Q V K A Q L A Q N
gm007212_Glyma0    L L L H I P A H D R C E A V V T I T Y E A Q A R I R D P V Y G C V S H I F A L Q Q Q V A R L Q A Q L M Q V K A Q L T Q N
 
AT2G42430.1     Q T S A A G D L R H S S E S T N Q F M T W Q Q T S V S P I G S A Y S T P Y N H H Q P Y Y G H V N P N N P V S P Q S S L E
gm026683_Glyma1    H M E P R - - - - - N F E N - - - - - H W S E N V A Q - - S - - - F N P F - - - - - C P T S M N N - - L I S P Q S S L D
pt040295_POPTR_    L I D S T R - - - I N I E N T H H - - Q W Q G N N I S - - G - V S S F P S - - - - - Y Q T Y I N P - - - I S P Q S S L D
gm007212_Glyma0    L V E S R - - - - - N I E N N H H - L Q G N N N N V T - - G Q L M N H P F - - - - - C P T Y M N P - - - I S P Q S S L E
 
AT2G42430.1     E - - - S F S N T S S D V T T T A N V R E T H H Q T G G G V Y G H D G I G F H E G Y P N K - K R S V S Y C S S D L G E L
gm026683_Glyma1    S L G - - Y S S I N D G - M S M L D V Q S S R E E - - - - - - - - - - - Y F A L Q A C N S K K R - - S Y - N N D L G E L
pt040295_POPTR_    S V D L N N S N I D H G M M D M Q D I K S G E E - - - - - - - - - - - - - F A F Q S C A K V K R - - P Y - N S D L G E L
gm007212_Glyma0    S I D - - H S S I N D G - M S M Q D I Q S R E D - - - - - - - - - - - - - F Q I Q - - A K - E R - - P Y N N N D L G E L
 
AT2G42430.1     Q A L A L R M M K N - -
gm026683_Glyma1    Q E L A L R M I R N C D
pt040295_POPTR_    Q A L A L R M M R N - -
gm007212_Glyma0    Q E L A L R M M R N - -
 
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