fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42430.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040295 not found in 213aa AT2G42430.1 not_1st 0.444933920 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G42430.1     MASSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKL
pt040295_POPTR_ MASS----VTGTGSPCGACKFLRRKCASDCIFAPYFCSEQGTARFAAIHKVFGASNVSKL
                ****    .:**************************.****:******************

AT2G42430.1     LLNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQ
pt040295_POPTR_ LLHVPVADRYEAVVTIAYEAQARIRDPVYGCVAHIFSLQQQVACLQAQLMQVKAQLAQNL
                **:**: ** *************::*******:***:****** **:*:**:***:* : 

AT2G42430.1     TSAAGDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEE
pt040295_POPTR_ IDST---RINIENTHH--QWQGNNISGVSS-----FPSYQTYI------NPISPQSSLDS
                 .::   * . *.*::   ** ..:* :.*     :  :*.*       **:******:.

AT2G42430.1     SFSNTSS------DVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGE
pt040295_POPTR_ VDLNNSNIDHGMMDMQDIKSGEEFAFQSCAKV---------------KRPY---NSDLGE
                   *.*.      *:    . .*  .*: . *               **.    .*****

AT2G42430.1     LQALALRMMKN
pt040295_POPTR_ LQALALRMMRN
                *********:*
BoxShade v3.31 C (beta, 970507) Output
AT2G42430.1     M A S S G N G T T A G T G S P C G A C K F L R R K C A S D C I F A P Y F S S E Q G A A R F A A I H K V F G A S N V S K L
pt040295_POPTR_    M A S S - - - - V T G T G S P C G A C K F L R R K C A S D C I F A P Y F C S E Q G T A R F A A I H K V F G A S N V S K L
 
AT2G42430.1     L L N V P I H D R C E A V V T I A Y E A Q A R L H D P V Y G C V S H I F A L Q Q Q V A F L Q S Q V M Q M K A Q I A G H Q
pt040295_POPTR_    L L H V P V A D R Y E A V V T I A Y E A Q A R I R D P V Y G C V A H I F S L Q Q Q V A C L Q A Q L M Q V K A Q L A Q N L
 
AT2G42430.1     T S A A G D L R H S S E S T N Q F M T W Q Q T S V S P I G S A Y S T P Y N H H Q P Y Y G H V N P N N P V S P Q S S L E E
pt040295_POPTR_    I D S T - - - R I N I E N T H H - - Q W Q G N N I S G V S S - - - - - F P S Y Q T Y I - - - - - - N P I S P Q S S L D S
 
AT2G42430.1     S F S N T S S - - - - - - D V T T T A N V R E T H H Q T G G G V Y G H D G I G F H E G Y P N K K R S V S Y C S S D L G E
pt040295_POPTR_    V D L N N S N I D H G M M D M Q D I K S G E E F A F Q S C A K V - - - - - - - - - - - - - - - K R P Y - - - N S D L G E
 
AT2G42430.1     L Q A L A L R M M K N
pt040295_POPTR_    L Q A L A L R M M R N
 
0