fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001435 not found in 256aa AT2G42940.1 not_1st 0.600446428 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G42940.1     MAGGTALTPTSVGSKSVPMRNHEATERGNTNNNLRA------LPKAVQPVSSIE-GEMAK
pt001435_POPTR_ MAG---------DSERIMERNQESEKGHDRRPNMEAILVASKLPKAVPPISSARGGETLR
                ***         .*: :  **:*: :  : . *:.*      ***** *:** . **  :

AT2G42940.1     RPRGRPAGSKNKPKPPIIVTHDSPNSLRANAVEISSGCDICETLSDFARRKQRGLCILSA
pt001435_POPTR_ RPRGRPAGSKNKPKPPIIVTRDSANALRAHAMEVSSGCDVCESLANFARRKQRGISVLSG
                ********************:**.*:***:*:*:*****:**:*::********:.:**.

AT2G42940.1     NGCVTNVTLRQPASSGAIVTLHGRYEILSLLGSILPPPAPLGITGLTIYLAGPQGQVVGG
pt001435_POPTR_ SGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSVLPPPAPQGITGLTIYLAGAQGQVVGG
                .***********************:********:****** ***********.*******

AT2G42940.1     GVVGGLIASGPVVLMAASFMNAVFDRLPMDDDE-AASMQNQQYYQNGRSRPLD--DIHGL
pt001435_POPTR_ VVVGALIASGPVVIMAASFMNASFDRLPLDEDGITAAVQN-QHYQNGRRHHLDIPDLYGM
                 ***.********:******** *****:*:*  :*::** *:***** : **  *::*:

AT2G42940.1     PQNLLTNGNSASDIYSWGPAQRVMSKP
pt001435_POPTR_ PQKLLTNGAVTPEIYSWAPA-RTMSKS
                **:*****  :.:****.** *.***.
BoxShade v3.31 C (beta, 970507) Output
AT2G42940.1     M A G G T A L T P T S V G S K S V P M R N H E A T E R G N T N N N L R A - - - - - - L P K A V Q P V S S I E - G E M A K
pt001435_POPTR_    M A G - - - - - - - - - D S E R I M E R N Q E S E K G H D R R P N M E A I L V A S K L P K A V P P I S S A R G G E T L R
 
AT2G42940.1     R P R G R P A G S K N K P K P P I I V T H D S P N S L R A N A V E I S S G C D I C E T L S D F A R R K Q R G L C I L S A
pt001435_POPTR_    R P R G R P A G S K N K P K P P I I V T R D S A N A L R A H A M E V S S G C D V C E S L A N F A R R K Q R G I S V L S G
 
AT2G42940.1     N G C V T N V T L R Q P A S S G A I V T L H G R Y E I L S L L G S I L P P P A P L G I T G L T I Y L A G P Q G Q V V G G
pt001435_POPTR_    S G C V T N V T L R Q P A S S G A I V T L H G R F E I L S L L G S V L P P P A P Q G I T G L T I Y L A G A Q G Q V V G G
 
AT2G42940.1     G V V G G L I A S G P V V L M A A S F M N A V F D R L P M D D D E - A A S M Q N Q Q Y Y Q N G R S R P L D - - D I H G L
pt001435_POPTR_    V V V G A L I A S G P V V I M A A S F M N A S F D R L P L D E D G I T A A V Q N - Q H Y Q N G R R H H L D I P D L Y G M
 
AT2G42940.1     P Q N L L T N G N S A S D I Y S W G P A Q R V M S K P
pt001435_POPTR_    P Q K L L T N G A V T P E I Y S W A P A - R T M S K S
 
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