fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037731 not found in 266aa AT2G42940.1 1st_1st 0.611607142 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G42940.1     MAGGTALTPTSVGSKSVPMRNHEATERGNTNNNLRA------LPKAVQPVSSI-EGE-MA
pt037731_POPTR_ MAGAADLTFPSLGSERIMDRSQGLEKVNNHRPSIEAILMTPKLPKAVPPVSSAPDGETMI
                ***.: ** .*:**: :  *.:   : .* . .:.*      ***** ****  :** * 

AT2G42940.1     KRPRGRPAGSKNKPKPPIIVTHDSPNSLRANAVEISSGCDICETLSDFARRKQRGLCILS
pt037731_POPTR_ RRPRGRPAGSKNKPKPPIIVTRDSANALRAHAMEVSSGCDVCESLANFARRKQRGISVLS
                :********************:**.*:***:*:*:*****:**:*::********:.:**

AT2G42940.1     ANGCVTNVTLRQPASSGAIVTLHGRYEILSLLGSILPPPAPLGITGLTIYLAGPQGQVVG
pt037731_POPTR_ GSGCVTNVTLRQPTSSGAIVTLHGRFEILSLLGSVLPPPAPQGITGLTIYLAGAQGQVVG
                ..***********:***********:********:****** ***********.******

AT2G42940.1     GGVVGGLIASGPVVLMAASFMNAVFDRLPMDDDE-AASMQNQQYYQNGRSRPLD--DIHG
pt037731_POPTR_ GGVVGALIASGPVVIMAASFMKATFDRLPLDDDEITAAVQN-QHYQNGRHHHLDISDLYG
                *****.********:******:*.*****:**** :*::** *:***** : **  *::*

AT2G42940.1     LPQNLLTNGNSASDIYSWGPAQRVMSKP
pt037731_POPTR_ MPQNLLTNGAVTPEIYSWTPG-RTMSKS
                :********  :.:**** *. *.***.
BoxShade v3.31 C (beta, 970507) Output
AT2G42940.1     M A G G T A L T P T S V G S K S V P M R N H E A T E R G N T N N N L R A - - - - - - L P K A V Q P V S S I - E G E - M A
pt037731_POPTR_    M A G A A D L T F P S L G S E R I M D R S Q G L E K V N N H R P S I E A I L M T P K L P K A V P P V S S A P D G E T M I
 
AT2G42940.1     K R P R G R P A G S K N K P K P P I I V T H D S P N S L R A N A V E I S S G C D I C E T L S D F A R R K Q R G L C I L S
pt037731_POPTR_    R R P R G R P A G S K N K P K P P I I V T R D S A N A L R A H A M E V S S G C D V C E S L A N F A R R K Q R G I S V L S
 
AT2G42940.1     A N G C V T N V T L R Q P A S S G A I V T L H G R Y E I L S L L G S I L P P P A P L G I T G L T I Y L A G P Q G Q V V G
pt037731_POPTR_    G S G C V T N V T L R Q P T S S G A I V T L H G R F E I L S L L G S V L P P P A P Q G I T G L T I Y L A G A Q G Q V V G
 
AT2G42940.1     G G V V G G L I A S G P V V L M A A S F M N A V F D R L P M D D D E - A A S M Q N Q Q Y Y Q N G R S R P L D - - D I H G
pt037731_POPTR_    G G V V G A L I A S G P V V I M A A S F M K A T F D R L P L D D D E I T A A V Q N - Q H Y Q N G R H H H L D I S D L Y G
 
AT2G42940.1     L P Q N L L T N G N S A S D I Y S W G P A Q R V M S K P
pt037731_POPTR_    M P Q N L L T N G A V T P E I Y S W T P G - R T M S K S
 
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